Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2207 ATGGCTTCGAGCTTATACCAGCACATGCTATTCCCTGTTTTCTTCGTAGTTGGTGTCCTCTGCTCATTGGCAGCTCCTTCTGTTGCTGAGCTACCCAAATTCAAACACCCTGCGGAAGCACAccaatatcttaattttttggtcGTTAGGGATTGGGGAAGAAAAGGAGCCTACAATCAATCTTTGGTCGCCCAACAGAAACTAAATATAGATTTTGTGATCTCCACTGGTGACAATTTTTTAGAAGATGGGCTAAAGGGGGTTGATGATCCAGCATTCTTCGAGTCATTCGTTGACATCTACACTGCCCCTAGCTTGCAAAAGACATGGTACAGTGTTCTGGGTAACCATGACTACAGAGGTGATGTTCAAGCACAAATAAGTCTCGTTCTAAGACAAAAAGTTAACAGATGGGGGTATAAATCCATTCAATGCATGTTTAAAATTGTGGAATTTTTCTTTGTGGACACAACTCCATTTGTAGACGAGTATTTTACAGACCCACGAGATCATACCTATGACTGGGAAGGCGTGCTTCCTCGCCCAGCTTACCTTTCAAAACTCTTGAAGGCAAAATGGAAGATGGTGGTGGGTCATCATACCATCAAAAGTGCTAGGTATCATGGTAACACCGAAGAGCTTAAACAGCTGCTTGTTCCCATCTTAGAGATCACCAAAAGCAATGCAGATATCATATTTTATGATGTTTTTGGCAATGCTTTGCATAGGTGGAGCATATCCAAAGACCGCAACGTAGCAGCCTGGATATAA 771 0.4163 MASSLYQHMLFPVFFVVGVLCSLAAPSVAELPKFKHPAEAHQYLNFLVVRDWGRKGAYNQSLVAQQKLNIDFVISTGDNFLEDGLKGVDDPAFFESFVDIYTAPSLQKTWYSVLGNHDYRGDVQAQISLVLRQKVNRWGYKSIQCMFKIVEFFFVDTTPFVDEYFTDPRDHTYDWEGVLPRPAYLSKLLKAKWKMVVGHHTIKSARYHGNTEELKQLLVPILEITKSNADIIFYDVFGNALHRWSISKDRNVAAWI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2207 256 PANTHER TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 223 253 - -
Ssu5g2207 256 PANTHER PURPLE ACID PHOSPHATASE 223 253 - -
Ssu5g2207 256 PANTHER PURPLE ACID PHOSPHATASE 12 223 - -
Ssu5g2207 256 Pfam Calcineurin-like phosphoesterase 47 233 IPR004843 GO:0016787
Ssu5g2207 256 Gene3D - 39 235 IPR029052 -
Ssu5g2207 256 PANTHER TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 12 223 - -
Ssu5g2207 256 SUPERFAMILY Metallo-dependent phosphatases 45 248 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2207 Ssu-Chr5 63248563 63266117 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2207 5 63248563 63266117 Ssu5g2207 5 63248563 63266117 ECH