Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2190 ATGACCATGCCCATGCGCATGCACCATAAGGACAAGATTGCGAAGCTTCCCGAAGAGTTAGCGGAGGAGGAGGATATGAAACTGTATGGGTTCGGTTTAccccatcaccatcaccacgaTCACCATATTGAGGATACTCAATTATCGGGTTTAGgtcTTTGGTTGAATGCATTGGGCTGTTCATTTCTGGTGAGCATGGCTTCTCTTATTTGCCTGATTGTCCTGCCTGTAATTTTtgTACAAGGGAAACCATCAAAGGCTGTTGTTGATTCATTGGCTTCGTTTGGGGCAGGAGCTATGTTGGGGGATGCATTTCTTCACCAATTACCACATGCTTTTGGTGGAGAACATTCCCATTCTAATGGTAACCATGGAGATCATGACCATCATACTAGTTCTGGACATGGTCATTCACATTCTTTAGCCGATCTTTCTATAGGAATATCCATCCTTGCTGGAATTGTACTATTTCTTCTTGTGGAGAAGGTAGTGAGGTATGTTGAAGAAAACTCTGGAGGAGCTAATTCATGGACGCATGGACACCACCACCATAACCACAATagcaagaaaaaattgaaagatgaTAACAGTTCTACTGTCAACTTGCAGTCAAAGTCTTCCAATGCAAAAGAAGAGAGATTGCTagatgagaaaaaagaagatgatCATGCATCACATGACTCTTTGAAGGGAGATAATCCTTCTCAATCTGAAACCTCACTCAGAAAGAGAATTGGAAGCAATCTGACCAAAGGTCATAATCTCGATGCTAGTACTGTAGATAGCTCCACAAATAATATCGAATCTTCGAATGTTAAGGAACCAGTTAGATCACCAACAAATCTTGTGTTTGGTTATCTCAATCTTTTCTCTGATGGAGTCCATAACTTCACCGATGGAATGGCATTAGGAAGTGCATTCATGCTTTATGGATCTGTTGGTGGCTGGTCTAGAACTCTGTTTTTGCTGGCACATGAGCTTCCTCAAGAGATTGGTGATTTTGGCATTCTTATAAGATCTGGTTTCAGCATACCAAAAGCTTTGTTCTTCAACTTTCTGTCAGCACTTATGGCACTTGCAGGGACTGCATTGGCTCTGCTGTGGGGGAAAGATCCTGGACAGTCATCTCTGATTGAGGGATTTACAGCAGGTGGATTTATATACATTGCAATTGCGGGAGTACTTGCAGAAATGAATAACAGTGGGAATACAACATTTAGAAGTACAGTTGTCCAAATAATCTCACTGACAATGGGCATGGCTGTTGCCCTTGGTATTTCCCTTGTAGAATGA 1293 0.3983 MTMPMRMHHKDKIAKLPEELAEEEDMKLYGFGLPHHHHHDHHIEDTQLSGLGLWLNALGCSFLVSMASLICLIVLPVIFVQGKPSKAVVDSLASFGAGAMLGDAFLHQLPHAFGGEHSHSNGNHGDHDHHTSSGHGHSHSLADLSIGISILAGIVLFLLVEKVVRYVEENSGGANSWTHGHHHHNHNSKKKLKDDNSSTVNLQSKSSNAKEERLLDEKKEDDHASHDSLKGDNPSQSETSLRKRIGSNLTKGHNLDASTVDSSTNNIESSNVKEPVRSPTNLVFGYLNLFSDGVHNFTDGMALGSAFMLYGSVGGWSRTLFLLAHELPQEIGDFGILIRSGFSIPKALFFNFLSALMALAGTALALLWGKDPGQSSLIEGFTAGGFIYIAIAGVLAEMNNSGNTTFRSTVVQIISLTMGMAVALGISLVE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2190 430 MobiDBLite consensus disorder prediction 172 274 - -
Ssu5g2190 430 MobiDBLite consensus disorder prediction 115 138 - -
Ssu5g2190 430 MobiDBLite consensus disorder prediction 120 136 - -
Ssu5g2190 430 PANTHER ZINC TRANSPORTER ZIP13 8 430 - -
Ssu5g2190 430 PANTHER ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 8 430 - -
Ssu5g2190 430 MobiDBLite consensus disorder prediction 230 274 - -
Ssu5g2190 430 MobiDBLite consensus disorder prediction 209 229 - -
Ssu5g2190 430 Pfam ZIP Zinc transporter 52 426 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2190 15 379 Organic Solute Cotransporters AT1G68100 62.228 3.38e-135 393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2190 5 62872720 62886883 Ssu5g2190 5 62872720 62886883 ECH