Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1939 ATGGGAGCACTCATGATCCTCCTTTCCTTGCAGCCCCTCTCACTCACCTTCTTCCTCATCCTCTTCTACATAACACTCACCGTGCTCTGGCGAGGCAAGAAAGTCTCCGGCGCCGGTCCGGCAACCTATCCTCTCATAGGATGCCTGATATCCTTCTACAAGAACAGGCACCGTTTGCTAGATTGGTACACTGAGTTACTAGCTCAGTCTCCCACCAACACCATAGTGGTTCAAAGGCTAGGTGCACGTAGAACCATTGTGACCGCAAACCCAGAAAATGTTGAGTACATACTCAAGACAAACTTCAGCAACTTCCCCAAAGGCAAGCCCTTCACTGAGATCCTTGGTGACTTCCTTGGCCAAGGAATTTTCAACGTGGACGGCGAGCTATGGCTCACGCAGCGCAAATTGGCGAGCCATGAGTTCTCTGCCAAGTCCCTGAGGGAGTTTGTCATGCACACGTTGGAGAGGGAAGTGTGTGAGAGGCTTTTGCCTGTGCTTGAGGCACTGTCCAATGAGAACAAGGTGGTTGACTTGCAAGAGTTGCTAGGGAGGTTCTCATTCAATGTGATCTGCAAGTTCACACTGGGGACTAATAGGTGCTGCTTGGACCCTTCTGTCCCTACTTGTCCCCTTGCAAAGGCTTTTGATGTGGCAGCTGAGGTATCTGCCAGACGTGGGGCAGCACCTTTGTTCATCGTCTGGAGGTTGAAGAGATGGCTTGGTGCTGGATCTGAAAGATTGCTTAAGGAGGCTGTTGGGGAAGTTCAGACCCATGTCATGAAAATGATTCAGGAGAGGAAGCACAAGGGAGAGGAAAGCAAGGAAAGTGGTGTTGAAGATCTCTTGTCAAGGCTTATCTGTGCAGGTCATGAGGAGGGGGCGATTAGAGACACGGTGATAAGCTTCATCATGGCAGGGAGGGACACTACTTCAGCAGCTATGACATGGCTCTTCTGGCTGCTATCACATTATTCCCATGTGGAGCAGCAGATAGTGGAAGAGGCAAAAGGGGGGTTGGATTATGAATCACTGAAGAGTTTGAATTTGTTGAAGGCATGTTTGTGTGAGTCCATGAGGCTGTATCCCCCAGTGGCATGGGACTCTAAGCATGCCACTGGTGATGATCTGCTGCCAGATGGCACTGTGGTCAAGGCAGGAGATAGGGTCACATATTTTCCCTATGGAATGGGGAGAATGGAAGCCTTGTGGGGGAAGGACTGGCTTGAATTTAGACCAGATCGATGGTTTGTGGAACCAGGCAAGAGTGAAGGGATGTTGAGTGAGGTTTCTCCTTTCATGTTTCCAATTTTTCAGGCTGGTCCAAGGGTGTGTCTAGGGAAGGAAATGGCCTTCATTCAAATGAAGTATGTTGTGGCTTCAATTCTAAGCCGATTCAAATTTAGAATTGTTAGTCCAGAGAGGCCTATATTTGTGCCACTGCTCACGGCACACATGGCCGGCGGCTTAAGAGTCTTGGTTTGTAAAAGGGAGAAACTGAGTTAG 1506 0.494 MGALMILLSLQPLSLTFFLILFYITLTVLWRGKKVSGAGPATYPLIGCLISFYKNRHRLLDWYTELLAQSPTNTIVVQRLGARRTIVTANPENVEYILKTNFSNFPKGKPFTEILGDFLGQGIFNVDGELWLTQRKLASHEFSAKSLREFVMHTLEREVCERLLPVLEALSNENKVVDLQELLGRFSFNVICKFTLGTNRCCLDPSVPTCPLAKAFDVAAEVSARRGAAPLFIVWRLKRWLGAGSERLLKEAVGEVQTHVMKMIQERKHKGEESKESGVEDLLSRLICAGHEEGAIRDTVISFIMAGRDTTSAAMTWLFWLLSHYSHVEQQIVEEAKGGLDYESLKSLNLLKACLCESMRLYPPVAWDSKHATGDDLLPDGTVVKAGDRVTYFPYGMGRMEALWGKDWLEFRPDRWFVEPGKSEGMLSEVSPFMFPIFQAGPRVCLGKEMAFIQMKYVVASILSRFKFRIVSPERPIFVPLLTAHMAGGLRVLVCKREKLS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1939 501 Pfam Cytochrome P450 39 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1939 501 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 15 497 - -
Ssu4g1939 501 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1939 501 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1939 501 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1939 501 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1939 501 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1939 501 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1939 501 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1939 501 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1939 501 PANTHER CYTOCHROME P450 15 497 - -
Ssu4g1939 501 Gene3D Cytochrome P450 22 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1939 501 SUPERFAMILY Cytochrome P450 39 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1939 Ssu-Chr4 36697650 36699155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1939 37 498 Cytochrome P450 AT3G01900 60.426 0.0 588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1939 4 36697650 36699155 Ssu4g1939 4 36697650 36699155 ECH
Ssu5g3398 5 84256942 84257334 Ssu4g1939 4 36697650 36699155 ECH