Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu3g1919 | ATGTATGGTCATGTGGAAAAACTAGCAAGGGAAATATTGCTCGGGGTTAATTCTGTAGAGGGTGTTGAGGGCAAACTGTGGCAGCAGGTACCTGAGACACTGCCACCTGAGGAGCTCGATAGGCTGAGAGCACCACCCAAGAGTGATGAACCAATTATTAACGCATTTAAACTGCCTGAAGCAGATggttttgtctttggcttcccAACAAGGTTTGGAATGATGGCTGCTCAGTTTAAGGCTTTCCTAGATACAACTCAATATCTATGGAAAGCACAAATGCTTGCATCCAAGCCTGCTGGAATCTTCTACAGCACCAGTTCCCAAGGTGGTGGACAAGAGACTGCACCGTTTACTGCTATCACTCAGTTGGTTCATCACGGAATGATATTTGTTCCAATAGGATACACATTCGGTCCTGGCATGTTTGAGATGAAGGAGCTGAAAGGTGGAAGTCCTTATGGAGCAGGAACTTATACTGGTGATGATGGCTCTAGACAGCCGACTAAACTCGAATTGGAGCAAGCATTCCACCAAGGGAATTATATCGCCACCATCGCAAAGAAGCTCAAGGAAGATGTTCACCCAATTTTTACTCTACATAAAAGAGGATATTAA | 618 | 0.432 | MYGHVEKLAREILLGVNSVEGVEGKLWQQVPETLPPEELDRLRAPPKSDEPIINAFKLPEADGFVFGFPTRFGMMAAQFKAFLDTTQYLWKAQMLASKPAGIFYSTSSQGGGQETAPFTAITQLVHHGMIFVPIGYTFGPGMFEMKELKGGSPYGAGTYTGDDGSRQPTKLELEQAFHQGNYIATIAKKLKEDVHPIFTLHKRGY | 205 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu3g1919 | 205 | TIGRFAM | flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV | 1 | 190 | IPR010089 | GO:0003955|GO:0010181 | |
| Ssu3g1919 | 205 | Pfam | NADPH-dependent FMN reductase | 58 | 134 | IPR005025 | GO:0016491 | |
| Ssu3g1919 | 205 | Gene3D | - | 1 | 193 | IPR029039 | - | |
| Ssu3g1919 | 205 | PANTHER | FLAVODOXIN-RELATED PROTEIN WRBA-RELATED | 1 | 191 | - | - | |
| Ssu3g1919 | 205 | SUPERFAMILY | Flavoproteins | 1 | 191 | IPR029039 | - | |
| Ssu3g1919 | 205 | ProSiteProfiles | Flavodoxin-like domain profile. | 1 | 183 | IPR008254 | GO:0010181 | |
| Ssu3g1919 | 205 | PANTHER | FLAVOPROTEIN WRBA, FLAVOPROTEIN-LIKE DOMAIN PROTEIN-RELATED | 1 | 191 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu3g1919 | Ssu-Chr3 | 60328832 | 60330545 | Dispersed/Proximal |