Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1916 ATGGCACTCCAATGGGGTGCAAGGAAGAGAAATGAAAGGAAGGGGAAGTTGGAGGGGTGTGATGAGAAGGGGGCTGGGGGGTTCTTGGATTTCAAggctttcaaatttcaaagttcTTTGAAGATCTTGGAGTCTGAGTCTCTAGGATATGATGCATTCTTGCTGGGGatgatttcatttttaataaacgGGAATGTTTCTTTCACGTACTATTCAATGTATGGGCATATAGAAAGACTGGCAAGGAAAGTGGAGGAAGGGGCTAACCTTGTAGAAGGTGTTGAGGCCATACTATGGCAGGCATGTGTTTATGTTTCATTGAACGCAGTACCTGAAACACTGACAACTGAGGAGCTTGCTAAGCTGGGAGCACCACCCAAGAGCGATGTGCCAATCATTCACCCCAATGAGCTCTCTGAGGCTGATGGTTTTATCTTTGGCTTCCCAACAAGATTTGGAATGATGGCTGCTCAGTTTAAGGCTTTTCTAGATGCAACTGAAGATCTACGTAAAACACAACAGCTTGCAGGCAAACCTGCTGCAATCATCACCAGCACCAGCTCCCAAGGTGGTGGACAGGAGACGACAGTGCTTACTGGTATGACCCCGCTGGTTCATCATGGAATGATATTTGTTCCATTTGGAATGGGATTTACATACGGTCATGAGTTCGGCTATTTGAAGGAAGTGAAAGGTGGAAGTCCATATGGTGCAGGAATTTATGCTGGAAGAGAGGGGCCAACTTGGTTAGAGTGGATGCATGCATTCCAGCAAGGGTATTTCTTTGCCAACATCACAAAGCAGCTCAAGGAAGCTACTGCATAA 825 0.4436 MALQWGARKRNERKGKLEGCDEKGAGGFLDFKAFKFQSSLKILESESLGYDAFLLGMISFLINGNVSFTYYSMYGHIERLARKVEEGANLVEGVEAILWQACVYVSLNAVPETLTTEELAKLGAPPKSDVPIIHPNELSEADGFIFGFPTRFGMMAAQFKAFLDATEDLRKTQQLAGKPAAIITSTSSQGGGQETTVLTGMTPLVHHGMIFVPFGMGFTYGHEFGYLKEVKGGSPYGAGIYAGREGPTWLEWMHAFQQGYFFANITKQLKEATA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1916 274 Gene3D - 63 273 IPR029039 -
Ssu3g1916 274 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 66 272 - -
Ssu3g1916 274 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1 66 272 - -
Ssu3g1916 274 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 66 269 IPR010089 GO:0003955|GO:0010181
Ssu3g1916 274 Pfam NADPH-dependent FMN reductase 137 212 IPR005025 GO:0016491
Ssu3g1916 274 ProSiteProfiles Flavodoxin-like domain profile. 66 274 IPR008254 GO:0010181
Ssu3g1916 274 SUPERFAMILY Flavoproteins 67 269 IPR029039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1916 Ssu-Chr3 60287718 60291358 Tandem