Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1915 ATGGCTATCAAAGTTTACATTGTATATTGGTTTGTTGTTATCCTTATTTCGTTGGGCTCTGTAATTGCCTTCTTGAATAGTTCTTCCACATTTCCTTCGGTGGCCCATCCAAATCTTCATCTAGTCAAAGTACCTGAGACACTGACAATTGAGGAGCTTGGTGCACTGAGAGCACCACCCAAGAGTGATGCACCAATCATCACCCCTGATCAGCTCCATCATGCTGATGGTTTTGTGTTTGGCTTCCCAACAAGATTTGGAATGATTGCTGCTCAGTTTCAAGCTTTCCTGGATTCAACCAGATTATTATGGGAAGAAGAACTGCTTCAAGGCAAGCCAGCTGGAATCTTCTTCAGCACCGGTTGCCAAGGTGGTGGACAAGAGACTACAGCGCTCACAGCTATCCCTCAGTTGGTTAATCATGGAGTGTTGTTTGTTCCAATTGGGTTTACACCAATTAGAATGTTTGAGACGGAGGAAGTGAGAGGTGGGAGTCCATATGGTGCAGGAACATATGCTGGTACAAATGGCTCAAGGAAGCCAAGTAAGATTGAGCTGAGGCAAGCTTTCTGCCAAGGGAAATGTATTGCCACCATCACAAAGAAGCTTAAGCGATGA 618 0.4482 MAIKVYIVYWFVVILISLGSVIAFLNSSSTFPSVAHPNLHLVKVPETLTIEELGALRAPPKSDAPIITPDQLHHADGFVFGFPTRFGMIAAQFQAFLDSTRLLWEEELLQGKPAGIFFSTGCQGGGQETTALTAIPQLVNHGVLFVPIGFTPIRMFETEEVRGGSPYGAGTYAGTNGSRKPSKIELRQAFCQGKCIATITKKLKR 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1915 205 Gene3D - 35 205 IPR029039 -
Ssu3g1915 205 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 35 204 - -
Ssu3g1915 205 SUPERFAMILY Flavoproteins 40 204 IPR029039 -
Ssu3g1915 205 Pfam NADPH-dependent FMN reductase 70 147 IPR005025 GO:0016491
Ssu3g1915 205 PANTHER FLAVOPROTEIN WRBA, FLAVOPROTEIN-LIKE DOMAIN PROTEIN-RELATED 35 204 - -
Ssu3g1915 205 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 39 203 IPR010089 GO:0003955|GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1915 Ssu-Chr3 60265138 60267116 Tandem