Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu3g1914 | ATGGCAGTCcaagtttatattgtGTACTACTCAATGTACGGGCATGTGGAGAGACTGgcagaagaaataaagaaaggagCAGATTCTGTGGAAGGCGTTGAAGCCAAACTATGGCAGGTAGCTGAGACATTGCCAGATGAGGTGCTTGGCAAAATGAGAGCACCACCCAAGAGTGATGTACCAATCATTACCCCCAATGAACTCTCTGAGGCTGATggttttgtctttggcttcccCACAAGATTTGGAATGATGGCTGCACAGTTCAAAGCTTTTCTAGATGCAACTGGAGGTTTATGGAAAACACAACAACTTGCAGGCAAGCCTGCAGGAATCTTCTACAGCACCAGTTCCCAAGGTGGTGGGCAAGAGACTACAGCGCTTACTGCTATAACTCAGCTGGTTCATCATGGAATGTTGTTTGTTCCAATTGGATACACATTTGGTGCTGGAATGTTCGAGATGGAGGAACTGAAAGGTGGAAGTCCGTATGGTTCAGGAACTTATGCTGGTGATGGTTCAAGACAGCCAACTAAGCTTGAGCTGGAGCAAGCATTCCACCAAGGCAAGTATATCGCCAGCATCACAAAGAAGCTCAAGGAAGCTGCATAA | 612 | 0.4281 | MAVQVYIVYYSMYGHVERLAEEIKKGADSVEGVEAKLWQVAETLPDEVLGKMRAPPKSDVPIITPNELSEADGFVFGFPTRFGMMAAQFKAFLDATGGLWKTQQLAGKPAGIFYSTSSQGGGQETTALTAITQLVHHGMLFVPIGYTFGAGMFEMEELKGGSPYGSGTYAGDGSRQPTKLELEQAFHQGKYIASITKKLKEAA | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu3g1914 | 203 | PANTHER | FLAVODOXIN-RELATED PROTEIN WRBA-RELATED | 5 | 203 | - | - | |
| Ssu3g1914 | 203 | Pfam | NADPH-dependent FMN reductase | 17 | 144 | IPR005025 | GO:0016491 | |
| Ssu3g1914 | 203 | PANTHER | FLAVOPROTEIN WRBA, FLAVOPROTEIN-LIKE DOMAIN PROTEIN-RELATED | 5 | 203 | - | - | |
| Ssu3g1914 | 203 | ProSiteProfiles | Flavodoxin-like domain profile. | 5 | 192 | IPR008254 | GO:0010181 | |
| Ssu3g1914 | 203 | SUPERFAMILY | Flavoproteins | 4 | 200 | IPR029039 | - | |
| Ssu3g1914 | 203 | Gene3D | - | 2 | 201 | IPR029039 | - | |
| Ssu3g1914 | 203 | TIGRFAM | flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV | 3 | 199 | IPR010089 | GO:0003955|GO:0010181 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu3g1914 | Ssu-Chr3 | 60260376 | 60262511 | Dispersed/Wgd |