Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1852 ATGGAGATCACTAAAGGCAGTTCCATCCTAATTGTGGTGCTATGCTTTGTCTCATGTTTGAGCCAGGCCAATGCATATTATTACCGGCAATGTAGCACCAAAGGAACCCGATGCTACGGAAAGTACATTGCATGTCCAACGGAGTGCCCAAGCAGTGAATCAACAGATCCTAAGGCTAAGGTTTGTCAAATTAATTGCGACAAACCTATATGCAAAGCTGTATGCAGAAGTCGCAAACCAAACTGTAATGCACGAGGATCAGGGTGTTATGACCCCCGTTTCATTGGTGGGGATGGCAGGGTGTTCTACGTCCACGGAAAGAGCAATGAACACTTCACCTTAGTCTCTGACTCCGCCCTTCAAATCAATGCTCGCTTCATGGACACAGGCCAGCAGACACCCCAATGGAATGAAAATGTTGACCATCTCAAATTCACATACAATGGCAACCATCTTGTTCTCCCTGAAGACCCTCTTTCCACTTGGCACTCTCCACTAAAAGATGTGAAAGTGGAGAGAGTAGCTGCCAGGAACAATGCCATTGTTACACTAGAGGATGTTGCTGAAATTTTGGTCAATGTGGTGCCAGTGAGCAAAGAAGATGATACAATTCACAACTACCAAGTGCCTAATGATGATTGCTTTGCTCACTTGGAAGTTCAATTCAGGTTCTTTGCCTTGTCCCCAAAAGTTGATGGTGTGCTTGGTAGGACTTATAGGGAAGATTTTGAGAACCCTGCAAAGCCTGGTGTGGCAATGCCTGTTGTTGGAGGAGAGGACACATACAGGACTACCTCCTTGCTCTCTCCATATTGTGCTGCTTGTGTGTTCTCACACCAAAGTTCACATGAGAAAGACACCAATAAAGTGTCAAAGTTAAAGGCACCCTTGATTGCTCCAAGTTTTCTTATGGGTTGGGAATAG 924 0.4524 MEITKGSSILIVVLCFVSCLSQANAYYYRQCSTKGTRCYGKYIACPTECPSSESTDPKAKVCQINCDKPICKAVCRSRKPNCNARGSGCYDPRFIGGDGRVFYVHGKSNEHFTLVSDSALQINARFMDTGQQTPQWNENVDHLKFTYNGNHLVLPEDPLSTWHSPLKDVKVERVAARNNAIVTLEDVAEILVNVVPVSKEDDTIHNYQVPNDDCFAHLEVQFRFFALSPKVDGVLGRTYREDFENPAKPGVAMPVVGGEDTYRTTSLLSPYCAACVFSHQSSHEKDTNKVSKLKAPLIAPSFLMGWE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1852 307 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 131 291 - -
Ssu3g1852 307 Pfam Root cap 221 277 IPR009646 -
Ssu3g1852 307 PANTHER CONSTITUENT OF CELL WALL, PUTATIVE-RELATED 2 128 - -
Ssu3g1852 307 PANTHER CONSTITUENT OF CELL WALL, PUTATIVE-RELATED 131 291 - -
Ssu3g1852 307 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 2 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1852 Ssu-Chr3 58037188 58038959 Proximal