Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1850 ATGGGTATCTCAAGTAGCAATAGCTTAATGTATCTCCTGCTATTGTTTACATTCTCTGAATTGCAAATAATTGCAGGAAAAGACACTCTGTCATGCACCTTCCGCAGCAGTCCATGCTTTAGGAGAAAAGCACCATGCCCTTCTGAGTGCCCTCTTAAATCACCATCTGACGCAAAAGCCAAAGTCTGCTTTCTCGACTGTGATTCTCCCACATGCGAAACTCAGTGCAAAACTCGCAAACCGAATTGTAACGGCCGTGGATCTGCATGCCTGGACCCCCGTTTTGTTGGGGCAGACGGAACTGTTTTCTACTTCCACGGAAGGAGAAACGAGCATTTCGCGTTAGTATCCGACGTCAACTTCCAAATCAATGCACGTTTCACTGGCCTGAGGCCTGCAACGAGAACCAGGGACTACACCTGGATTCAAGCACTGGGAATCCTCTTTGGCTCTCACAAGCTTACCGTCGAGGCCACCCCGGCAGCAACATGGGACGGTGAAATTGACCACTTGAAGTTCTCTCACAACGGCAAAGAACTCGTCGTCCCGGAAGGGCACCTCTCCGCCTGGCGGGGCCCGCAAAGTCAACTCAGAATAGAGAGGACGTCGAGCAAGAACGGTGTCACCGTTACACTGCAAGAAGCTGCCGAGATATCCGTGAATGTTGTGCCTGTCACCAGGGAAGACAGTAGGACCCACAACTACCAGATTCCCGATGATGATTGCTTTGCCCACTTGGAGGTGCAGTTTAGATTCCACGGTTTGTCTAACAAAGTCGATGGGGTTCTTGGAAGGACTTATCAGCCAGATTTTCGGAATCCGGCAAGGTTGGGGGTGGCAATGCCAGTGCTTGGAGGGGAAGATAGGTACAGAACCGCTTCACTCGTTTCTGAAGATTGTGGGGTCTGTTTGTTTGCTGCAAAACAAGCTTCTGAGAAGATGGACTCCGTGAGTGAATATGGTGTGCTGGACTGCACCGGTGTTGCCAACGGTGGGAATGGCATAGTTTGCAGAAGATGA 1020 0.5049 MGISSSNSLMYLLLLFTFSELQIIAGKDTLSCTFRSSPCFRRKAPCPSECPLKSPSDAKAKVCFLDCDSPTCETQCKTRKPNCNGRGSACLDPRFVGADGTVFYFHGRRNEHFALVSDVNFQINARFTGLRPATRTRDYTWIQALGILFGSHKLTVEATPAATWDGEIDHLKFSHNGKELVVPEGHLSAWRGPQSQLRIERTSSKNGVTVTLQEAAEISVNVVPVTREDSRTHNYQIPDDDCFAHLEVQFRFHGLSNKVDGVLGRTYQPDFRNPARLGVAMPVLGGEDRYRTASLVSEDCGVCLFAAKQASEKMDSVSEYGVLDCTGVANGGNGIVCRR 339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1850 339 Pfam Root cap 249 305 IPR009646 -
Ssu3g1850 339 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 3 339 - -
Ssu3g1850 339 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 3 339 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu3g1850 Ssu-Chr3 58024866 58027441 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1850 3 58024866 58027441 Ssu3g1850 3 58024866 58027441 ECH