Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1175 ATGGATCAATCACAGAATCAGAGACCCGCGACGACTGCAACCACACCCTCGCGCTCTTTCCAGTTCCACCCTGCTCGAGGCCCCATTCTCGATCTCTTCAACCTCTACTTAGGACTCGGcCAAAATACCCGCCAGAAACCCGAAGACTCACTCCGCGACCCACCGAACAAGACGCAGAAACGCGTACATGCTCTTAATCGGGAGCTTCCTCCACCAAATGAGCAGTTCATTCTAGATTTTGAGCAACTCCAGAGCCAGTTTCCTGACCAAGATCAATTACGTTCTGTTACAGAAGCGATTCTTATATCGCTAGTAGTGCAGTGTAGTGGTCATGGACCAAGGGCagactttcttctttttgttttacgGAGCTTATGTGGTATTGGATGCATTAACTGGGACTCCCTTCTGCCGTCCCTTCTATCTTCTGTTTCTTCGGCAGAATTGCCTGTTGGTCAACTGAGTCAAGCAGTGCCAACTGTTTCCTCATCGAGCTTATCACAGACAGGAGTGCTGCCACCTTCAAGCACGATTGCTAATTCTTCTAATTTTCAGTCTTCAAATCCTGCATCTCCTTTGACCTCTGTTCATACTATCGGCTCCCCTGCACAGCCAACGATTGAACCATTATCTTGTGCAGCTATGTCTCCTGTCAAATCGTCTGATATTTCCTCTACTGGACAACAATCTAAACTAGGAGGCAGTCCATCTGTTAGAAATAATGATATCAGTAATAGTAGCCTTCGTCAGCTATGTTGCAAGATTATTTTAACTGGTCTGGAGTTCAGTTTAAAACCATTGACTTATGCTGAAATCTTCCACCATATGCTGAACTGGCTGGTGAATTGGGACCAGAGGCAACAGGGAATTGATGAATCTGATATAATAAAATCGTGGAGACCTGACAAAGCCATAATTGCATGGCTACACAGTTGTTTGGATGTGATTTGGCTTTTAGTTGATGAGGGAAAATGTCGGGTGCCCTTTTATGAATTATTACGCAGTGATTTGCAATTCATAGAGAATATTCCTGATGATGAAGCATTGTTCACACTTATCTTGGAGATCCATAGGAGACGAGATATGATGGCTATGCACATGCAAATGTTAGACCAGCATCTTCATTGCCCTACATTTGGGACTCATAGGATCCTGAATCAGACAACACCTAATGTTTCAGGTGAAGCAGTGGCACACCTGCGACTATCACCAATTACATATTTAAGTGTACTTGGAGAACCATTGCATGGAGAGGATATTGCATCCTCTATTCAGAAGGGAAGTTTGGACTGGGAGAGGGCTGTACGTTGCATAAGGCATGCTCTTCGTACTACACCATCACCTGATTGGTGGAGACGCGTACTGGTTCTGGCTCCTTGCTATAGGCCTTCATCTCAAGTGCCTACTGCTGGTGCTGTTTTTTCTTCAGAGATGATCTGTGAGGCAACTATTGATAGAATTGTTGAActattgaaaatgacaaattcaGAGATAAATTGCTGGCAGGACTGGTTGGTCTTCTcagatattttctattttcttattaaaagtgGGTGcattgattttgttgattttgtggACAAGCTGGTTTCACGTCTTACAGAGGGTGATCACCATATACTTAAGACAAATCATGTGACTTGGTTGCTTGCACAGATAATTCGAATTGAGCTGGTCATGAATGCTTTGAATTCTGATTCTAGAAAGGTGGAGACAACCAGAAAGATTTTATCATTCCATCGAGAAGACAGAAGCTCGGATCCTAATAATCCTCAAAGTATCTTGCTTGATTTTGTAAGCAGTTGTCAAAATTTACGCATTTGGTCACTGAACTCATCAACTAGAGAATATCTGAACAATGAACAActtcaaaaaggaaaacaaatagaTGAATGGTGGAGACAAGCAAGCAAAGGGGACAGAATGATGGATTATATGAATATGGATGAACGCTCAATAGGGATGTTTTGGGTTGTGACCTACACAATGGCACAACCTGCTTGTGAAACAGTAATGAATTGGTTAAATTCTGCTGGAGTTGCTGACTTACTGCCAGGAACAAATTTACAACCAGCTGAGAGATTGATGGCTACACGAGAAGTGAGCCCACTGCCCATGTCATTGTTATCTGgattttcaataaacttatgtGCGAAGCTGTCTTATCAAATGGAAGAATCTCTATTTTCTGGGCAGGTTATACCCAGCATTGCAATGGTTGAAACTTATACTAGATTGTTGCTCTTAGCACCTCATTCACTTTTCCGTTCACATTTCAATCATTTGGTGCAAAGAAATCCTTCTTTGTTGAGCAAACCTGGGGTAACACTTCTAGTACTTGAGATATTGAACTACCGGCTGCTTCCACTTTACAGGTACCAGGGAAAAAGCAAAGCCCTGATGTATGATGTTACAAAGATCATTTCGGCTATAAAAGGAAAACGAGGAGATCATCGAGTATTCAGATTAGCTGAAAATCTGTGCCTGAATCTTATTTTTTCGTTGAGAGATTTCTTCTTGGTTAAACGGGAAGGAAAGGGCCCAACGGATTTTACTGAAACTTTAAATCGAGTGACTGTAATAACACTTGCTATCCTTATTAAAACTCGTGGGATTGCTGATGCTGATCACCtgctttatcttcaaaatatgtTGGAACAAATAATGGCAACTAGCCATCATACATGGTCAGAAAAAACACTACATCACTTTCCTTCTGTTCTGCGTGAAGCATTGAGTGGTCGAAGTGATAAAAGGAGCCTTGCAATACAAACCTGGCAGCAGGCAGAAACCACTGTAATACACCAATGCACCCAGCTTCTTTCACCATCAGCTGATCCTAGTTATGTTATGACCTATATCAGTCATAGTTTCCCTCAGCATCGACAATATCTATGTGCTGGTGCGTTGATATTAATGCATGGCCGTGCAGAAAACATTAACAGTGGAAACCTGGGACGCGTCCTGCGGGAATTCTCTCCTGAAGAGGTGACGTCTAACATTTACACAATGGTGGATGTTCTGCTTCATCATATGCAGATAGAGCTTCAACAAGGACACTCTTTACAGGACCTTATGTTAAAAGCTTGTGCAAGCCTTGCCTTTTTTGTTTGGACAAATGAGTTACTTCCTTTGGATATCTTGCTTCTGGCACTTATTGACCGCGATGATGATCCGCATGCTTTGCGTATTGTGATTAGTCTACTTGATAGGCAAGAGCTTCTGCAAAGAGTAAAACTCTTTTGTATGACTCGTGTGCACCCTGAACATTGGCTTTCCACAGGAATGTTCAAGCGGGCTGAGCTACAAAAGGCTCTTGGAAATCACCTTGCATGGAAGGATAGacTTATCGAAAATGATGCAATGGATGCAGCAGAAAGACTATTGGCCATGTATTCTCCATTGCTTGCTTATTATCCTCTGAGGTTTACATTTGTTCGTGATATACTTGCATACTTCTATGTGAATAATGTTATTCCTCCATTACATAACAATTCAAAATCTGGATCTATGGGAGATGCGTCAAACAATACACTGCGTACTGCACAAAGCAAGCCTCCAGCAGTATCTCAGTCTGGGCCAGCAAATGCTTCGGAGGGCCAAAAGGCATTTTACCAAATTCAGGATCCTGGCACATACACTCAGTTAGTTCTTGAGACTGCTGTTATCGAAATACTTTCCCTTCCCTCCAGCAATGCTCTCCATGGTGGTTCAAATAGTGTAGGGCAAGGTTCAGTGTTGCCAACATCACCTTCAGGGGGAAGCACAGATTCCTTAGGTGCAAGCAGATCAACTCCCTCAGTTTCTGGAATAAATACGTCTAATTTTGCTTCTCGAAGTGGGTATACATGTCAACAGCTGTCTTGCTTGTTAATTCAAGCTTGTGGCCTCCTACTGGCTCAGCTTCCTTCTGATTTTCACTCACAACTTTACTTGGAGACAACACGTATTATAAAAGAGAACTGGTGGCTTAAGGATGGAACAAGGTCGCTTGGGGAAATAGACTCTGCTGTTGGCTATGCTTTGTTAGATCCAACATGGGCTGCACAGGACAATACCTCCACAGCCATTGGAAATGTGGTGGCCTTGCTTCATTCTTTCTTCAGTAACCTCCCTCAAGAATGGCTTGAAGGGACTAATGTTATTATCAAGCAACTTCGGCCAGTAACATCAGTGGCAATGTTGAGGATAGCATTCCGTATAATGGGACCACTCCTTCCAAAACTTGCCAATGCTCATGCACTTTTCAACAAGACCCTCTCATCACTACTAAGTATATTAGTGGATGTATTTGGGAAAAACTCCCAGACAATGATTGCCGTTGATGTGTCCGACATAGCAGATATCATTGACTTCCTCCATCATGTCGTCCATTATGAGGGACAGGGAGGGCCTGTGCAGGCTAGCAGCAAACCACGACCAGAGGTTTTGGCTCTCATTGGAAGGGCATCAGAGAATTTACGTCCAGACATTCAACATTTGCTTTCACACCTAAATCCTGATGTGAATTCCTCGGTGTATGCAGCATCTCATCCCAAGTTAGTCCAGAATCCAACTTAG 4560 0.4175 MDQSQNQRPATTATTPSRSFQFHPARGPILDLFNLYLGLGQNTRQKPEDSLRDPPNKTQKRVHALNRELPPPNEQFILDFEQLQSQFPDQDQLRSVTEAILISLVVQCSGHGPRADFLLFVLRSLCGIGCINWDSLLPSLLSSVSSAELPVGQLSQAVPTVSSSSLSQTGVLPPSSTIANSSNFQSSNPASPLTSVHTIGSPAQPTIEPLSCAAMSPVKSSDISSTGQQSKLGGSPSVRNNDISNSSLRQLCCKIILTGLEFSLKPLTYAEIFHHMLNWLVNWDQRQQGIDESDIIKSWRPDKAIIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILNQTTPNVSGEAVAHLRLSPITYLSVLGEPLHGEDIASSIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPCYRPSSQVPTAGAVFSSEMICEATIDRIVELLKMTNSEINCWQDWLVFSDIFYFLIKSGCIDFVDFVDKLVSRLTEGDHHILKTNHVTWLLAQIIRIELVMNALNSDSRKVETTRKILSFHREDRSSDPNNPQSILLDFVSSCQNLRIWSLNSSTREYLNNEQLQKGKQIDEWWRQASKGDRMMDYMNMDERSIGMFWVVTYTMAQPACETVMNWLNSAGVADLLPGTNLQPAERLMATREVSPLPMSLLSGFSINLCAKLSYQMEESLFSGQVIPSIAMVETYTRLLLLAPHSLFRSHFNHLVQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAIKGKRGDHRVFRLAENLCLNLIFSLRDFFLVKREGKGPTDFTETLNRVTVITLAILIKTRGIADADHLLYLQNMLEQIMATSHHTWSEKTLHHFPSVLREALSGRSDKRSLAIQTWQQAETTVIHQCTQLLSPSADPSYVMTYISHSFPQHRQYLCAGALILMHGRAENINSGNLGRVLREFSPEEVTSNIYTMVDVLLHHMQIELQQGHSLQDLMLKACASLAFFVWTNELLPLDILLLALIDRDDDPHALRIVISLLDRQELLQRVKLFCMTRVHPEHWLSTGMFKRAELQKALGNHLAWKDRLIENDAMDAAERLLAMYSPLLAYYPLRFTFVRDILAYFYVNNVIPPLHNNSKSGSMGDASNNTLRTAQSKPPAVSQSGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPSSNALHGGSNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACGLLLAQLPSDFHSQLYLETTRIIKENWWLKDGTRSLGEIDSAVGYALLDPTWAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGTNVIIKQLRPVTSVAMLRIAFRIMGPLLPKLANAHALFNKTLSSLLSILVDVFGKNSQTMIAVDVSDIADIIDFLHHVVHYEGQGGPVQASSKPRPEVLALIGRASENLRPDIQHLLSHLNPDVNSSVYAASHPKLVQNPT 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1175 1519 MobiDBLite consensus disorder prediction 1168 1196 - -
Ssu2g1175 1519 PANTHER BNAA09G30010D PROTEIN 1 175 - -
Ssu2g1175 1519 PANTHER BNAA09G30010D PROTEIN 1232 1513 - -
Ssu2g1175 1519 PANTHER BNAA09G30010D PROTEIN 1115 1154 - -
Ssu2g1175 1519 PANTHER BNAA09G30010D PROTEIN 1155 1233 - -
Ssu2g1175 1519 PANTHER BNAA09G30010D PROTEIN 237 1114 - -
Ssu2g1175 1519 MobiDBLite consensus disorder prediction 1 21 - -
Ssu2g1175 1519 MobiDBLite consensus disorder prediction 1239 1267 - -
Ssu2g1175 1519 MobiDBLite consensus disorder prediction 218 239 - -
Ssu2g1175 1519 MobiDBLite consensus disorder prediction 1 23 - -
Ssu2g1175 1519 Pfam Mediator complex subunit 23 494 1100 IPR021629 -
Ssu2g1175 1519 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 1232 1513 IPR021629 -
Ssu2g1175 1519 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 1155 1233 IPR021629 -
Ssu2g1175 1519 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 1 175 IPR021629 -
Ssu2g1175 1519 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 1115 1154 IPR021629 -
Ssu2g1175 1519 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 237 1114 IPR021629 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1175 2 52546831 52596582 Ssu2g1175 2 52546831 52596582 ECH