Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1167 ATGGGTTCCGAAGGATCCAGTGTCGTCGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATTGGGGATGGAACTGTTAGCTATGGAATGGATGATGCTGACGATATATACATGCAGTCTTGGACTGGGACTATCATTGGCCCCCCTGGTACTGTTCACGAAGGGCGTATCTACCAGTTGAAATTGTTTTGTGGCAAGGATTATCCAGACAATCCTCCATCTGTTAGATTTCAGTCAAGGATTAACATGACATGTGTCAATCAAGAAACTGGAGTGGTTGATCCACATTTGTTTCCTATGCTTGCTACTTGGAAACGTGAGCGTACAATGGAAGACATTTTGATTCAATTGAAGAAAGAAATGATGTCTCCACAAAATCGAAAGCTAACTCAGCCTCCTGAAGGCAATGAAGAAGCCAGGATTGATCAAAAGGGGCTGGTGGTGAGATGTTGTATTGTGTAA 480 0.4313 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQSRINMTCVNQETGVVDPHLFPMLATWKRERTMEDILIQLKKEMMSPQNRKLTQPPEGNEEARIDQKGLVVRCCIV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1167 159 Pfam Ubiquitin-conjugating enzyme 41 134 IPR000608 -
Ssu2g1167 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 144 - -
Ssu2g1167 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Ssu2g1167 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 144 - -
Ssu2g1167 159 SUPERFAMILY UBC-like 9 142 IPR016135 -
Ssu2g1167 159 SMART ubc_7 14 158 - -
Ssu2g1167 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1167 Ssu-Chr2 52247588 52266499 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1167 2 52247588 52266499 Ssu2g1167 2 52247588 52266499 ECH