Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1156 ATGGCAATTATAAGTCTTTGCTTTTTAGCTCAGACTTACCAACATGCCAGTGCTGTGATTCAGTCACTGGTGGAGGAGGATATTAATGTCAAATTTTTGGTCCAACTGGATAAATTGATTTGCTTGATGGAAACTCCAATCTTTGCTTATCTTCGATTGCAGCTTCTTGAACCTGGAAGATATATTTGGCTATTCAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGcctttaaaatactaaaaactcGTTTAAAAGCTGTGCCATCGTATTCATTCAATGGTGAGCGATTGAGGAGAATTCCTTCAGGGGATCCCTACCAATTTCATCACATGCCTGATGGAATTCAAACCATTGAGGATGGTGATGTAACCGAAGATGATGGGATATCGCATAATGGAATAAATTTTGCTGCAAGGCTACAACAGTTTCAGCAAATGCAGCACGAGCATCTGGTGCTTTCCAAAACACAGACAAAGTCACGCAATCTTTCCACTTCATTGTCAAAGGAGGCACAAAGAGAGGAAGAACCAAGAAGACCTCAGTCTATTGAACTTAATGTTCCTCCTTCAAGAACATCAAAGAGAGGTCCATCTTGA 612 0.3971 MAIISLCFLAQTYQHASAVIQSLVEEDINVKFLVQLDKLICLMETPIFAYLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGERLRRIPSGDPYQFHHMPDGIQTIEDGDVTEDDGISHNGINFAARLQQFQQMQHEHLVLSKTQTKSRNLSTSLSKEAQREEEPRRPQSIELNVPPSRTSKRGPS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1156 203 MobiDBLite consensus disorder prediction 158 172 - -
Ssu2g1156 203 PANTHER TAX1 BINDING PROTEIN-RELATED 1 176 IPR026825 GO:0006661|GO:0070772
Ssu2g1156 203 Pfam Vacuolar protein 14 C-terminal Fig4p binding 1 92 IPR021841 -
Ssu2g1156 203 PANTHER PROTEIN VAC14 HOMOLOG 1 176 - -
Ssu2g1156 203 MobiDBLite consensus disorder prediction 158 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1156 Ssu-Chr2 52061748 52064677 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1156 2 52061748 52064677 Ssu2g1156 2 52061748 52064677 ECH