Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1152 ATGGCAACTGATCTTGATGGCAAAAGCGTTGAGAAAATGGCACCACATGTGAATGAACCAGTGTATGCATGGAGAAATGATTCTTTTGTTGCTGCATTTCCTTCAGAAGTGGTTCAAATAACTTATGGCATCAACTTTCCGCAGGCACCTGCTATTGGCTGCCAGTGGTTTTCTACATCCCCCTTGGATAATTTGGTTTATTCCATGCAAATAGCTTTGTCAAGAACCTTCTGCATTTATGAGGAGGTTGAGCAAATGTGCAATGCTGGACTTATTAAAGGAGGTTCTCTAGAAAATGCCATTGTGTGCAGtGCCAGTAAAGGTTGGTTGAATCCACCTCTTCATTTCAGTGATGAGCCATGTCGTCACAAGATCTTAGACCTTATTGGTGATCTCTCGCTGTTTGCTCAGTATGGGAATCAAGGACTCCCGGTGGCACATATCGTAGCATACAAGGGTGGCCATGCATTGCATGCTGATTTGGCGCGCCGCCTTATGGGAATGATTTGA 510 0.4431 MATDLDGKSVEKMAPHVNEPVYAWRNDSFVAAFPSEVVQITYGINFPQAPAIGCQWFSTSPLDNLVYSMQIALSRTFCIYEEVEQMCNAGLIKGGSLENAIVCSASKGWLNPPLHFSDEPCRHKILDLIGDLSLFAQYGNQGLPVAHIVAYKGGHALHADLARRLMGMI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1152 169 Gene3D lpxc deacetylase, domain 2 16 169 IPR011334 GO:0008759|GO:0009245
Ssu2g1152 169 SUPERFAMILY Ribosomal protein S5 domain 2-like 19 166 IPR020568 -
Ssu2g1152 169 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 10 166 IPR004463 GO:0008759|GO:0009245
Ssu2g1152 169 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 2 167 IPR004463 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1152 2 165 Carbohydrate Esterase AT1G25054 69.512 9.14e-82 243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1152 2 52007112 52018651 Ssu2g1152 2 52007112 52018651 ECH