Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1147 ATGGCGGATGTTTCCGGCGACGGCGCGGCGCTGTCGGTGTCGGGATCGTTCAAGGAGGGGAGAGGCTCGGCGCGGCGGCGCGGCGGTGGAGTGAGGCCGCCGAGCATGGACGCCGACGAGTTCATGAACCTGATGCACGGTTCGGATCCGGTGAAGGTGGAGCTCAATCGCCTCGAGAATGAAGTTCGAGATAAGGACAGGGAATTATCGGAGGCGCAGGCTGAGATTAAAGCCTTGAGGCTCTCTGAACGGCTCAGAGAAAAGGCCGTTGAAGAGCTGACGGAAGAACTGTCCAAGGTTGAAGGGAAGCTAAAACTAACGGAATCTCTTCTAGAAAGCAAGAAtctggaaataaaaaaaatcaacgatGAAAAGAAAGCATCAATGGCAGCTCAGTTTGCAGCTGAAGCCACTCTTCGAAGGGTCCACGCTGCCCAGAAAGATGATGACATGCCTCCAATAGAAGCAATTCTTGCTCCTTTGGAGGCTGAACTCAAGCTTGCTCGACAAGAGATTGCTAAACTACAAGATGATAACAAAGCTTTAGATCGTCTTACCAAATCTAAAGAAGCTGCACTACTTGAAGCTGAGAGGACTGTCCAGGTTGCCTTGGCTAAGGCCTCCATGGTGGATGATCTGCAGAACAAAAATCAAGAGCTAATTAAACAGATTGAGATTTGCCAGgaagaaaataaaattttggacaaaATGCATAGACAGAAGGTGGCAGAGGTTGAAAAGCTCACCCAGACTGTGAGAGAGCTAGAAGAGGCTGTCCTTGCAGGTGGTGCAGCCGCAAATGCAGTGAGAGATTATCAGCGGAAAGTTCAAGAAATGAATgaagaaagaaaaactctAGACAGGGAGTTGGCCCGTGCCAAGGTAACAGCAAACAGAGTAGCTGTTGTGGTTGCAAATGAATGGAAAGATGCTAATGATAAAGTGATGCCTGTCAAACAATGGCTTGAAGAACGTCGATTCTTGcagGGAGAAATGCAGCAACTTCGTGACAAGCTTGCTATAGTTGAGCGTGCTGCAAAATCTGAAGCACAGTTGAAAgaAAAATATCATTTACGACTTAAAGTGCTAGAGGAGAGTTTGAGAGGAAATTCTAACAGTAGTAATCGTGGCACCCCAGAGGGAAGAAGTGTGAGCAATGGCCCTTCTCGTCGTCAATCCCTAGGTGGAGCTGATAACTTCTCAAAACTAACCCCTAATGGTTTTTTATCTAAGAGAACACCATCCTCTCAGCTGAGGTCATCCCTATCCTCTAGCACAGTTTTGAAGCATGCTAAAGGAACATCTAAATCTTTTGATGGTGGTACAAGATCACTGGAAAGGAGTAAAATGCTTCAGAATGGAACACCTCCAAGTTACTCATTCAACCAATCTCTTGAAGAAACCAAAGAGAGCGAGGCAAGTGATAATTGGAAAGGAAATTCAGATGATAAGCCAAATGACTTCCCAACGGTGGATTCAGTGGATAGTGTTCCAGGTGTTTTGTATGATCTGCTGCAAAAAGAGGTCATAGCCTTGAGGAAAGCTGGTCATGAGAAAGATCAAAGcctaaaagataaagatgatgCTATTGAGATGTTAGCAAAGAAGGTAGATACATTGACCAAAGCCATGGAAGTTGAGGCAAAGAAGATGAGAAGGGAAGTAGCTTCTATGGAGAAGGAGGTAGCTGCTATGCGTGTGGGGAAAGAACAAGAGAACAGAGCAAAGCGGTTCGGCAATGTAAAGGGCCCTGTAAACAGTGCCCAGCATCAGCTAATTTCTAGAAGAAATGTGACACGGGGTGGATTAACACGCAGCACCCAATGA 1827 0.4461 MADVSGDGAALSVSGSFKEGRGSARRRGGGVRPPSMDADEFMNLMHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRLSERLREKAVEELTEELSKVEGKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALLEAERTVQVALAKASMVDDLQNKNQELIKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAIVERAAKSEAQLKEKYHLRLKVLEESLRGNSNSSNRGTPEGRSVSNGPSRRQSLGGADNFSKLTPNGFLSKRTPSSQLRSSLSSSTVLKHAKGTSKSFDGGTRSLERSKMLQNGTPPSYSFNQSLEETKESEASDNWKGNSDDKPNDFPTVDSVDSVPGVLYDLLQKEVIALRKAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRVGKEQENRAKRFGNVKGPVNSAQHQLISRRNVTRGGLTRSTQ 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1147 608 MobiDBLite consensus disorder prediction 367 492 - -
Ssu2g1147 608 MobiDBLite consensus disorder prediction 584 608 - -
Ssu2g1147 608 Coils Coil 269 296 - -
Ssu2g1147 608 Pfam Microtubule-associated protein 70 39 589 IPR009768 GO:0007010|GO:0008017
Ssu2g1147 608 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 3 608 - -
Ssu2g1147 608 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 3 608 IPR009768 GO:0007010|GO:0008017
Ssu2g1147 608 MobiDBLite consensus disorder prediction 367 467 - -
Ssu2g1147 608 Coils Coil 158 185 - -
Ssu2g1147 608 MobiDBLite consensus disorder prediction 1 38 - -
Ssu2g1147 608 Coils Coil 55 82 - -
Ssu2g1147 608 Coils Coil 541 561 - -
Ssu2g1147 608 Coils Coil 90 124 - -
Ssu2g1147 608 Coils Coil 318 352 - -
Ssu2g1147 608 MobiDBLite consensus disorder prediction 468 482 - -
Ssu2g1147 608 Coils Coil 210 258 - -
Ssu2g1147 608 MobiDBLite consensus disorder prediction 564 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1147 Ssu-Chr2 51905403 51913776 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1147 2 51905403 51913776 Ssu2g1147 2 51905403 51913776 ECH