Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1139 ATGAATCATGCACCATCTCAAGTTATGAATGTGGATCATGATGTTACATTACAgGAAGTTCAGGAGTATTTTGCCTACTACATAGTTAAAGACAGGTTAGGAATTGTTGCAAGTGCACACACTGTCTTTGCCGATAGGgatcctgaaaaggcaatgAGCCCTGCATGTATTGAGCTTGCAAAGCTACACTCAATTGCAGTTGATTTTGCAAAATCTGGTGTGCCAGCCGAAATACCACAACATCTACGTGTGGAAGAGTATCCAGATTTCATGGAAAAGCCAGACAAACCAAGTTACCAATCAAATAGCATAATAGGAAAGCTTTATCGTGAGGTGAAGAATGTTGCACAACACAAGAGTCTCACCAAGCCCTTCACTAGAAAAGTGGCAAGGCAATCATATGATCGCGACATGAAGATTGATGGCTTTGAGAAGTATACAGCCATTGCTTGTGAATACAAGAACATGTATGATTTCAAGTTGGGGAACCTAATGGATTACTATGGTATAGAGACAGAAGCAGAAATAATCAGTGGCAATATCTTGAAAATGTCAAAATCTTTCAATGAAAGAAAGGATTTGGAGGGAATTAATCATGCTGTGATGTCACTAAGAAAGGAAGCTAGAAGCTGGTTCGATGTGATGATAAACAAGTCAAATTCTCAAGGCGATAATGCCCATGCAATAGCATCAGCTTGGTACCATGTTACATATCATCCTAGTTATTGGGGATGCTACAATCAAGGGCTAAACAGGGACCATTTCCTCAGTTTCCCATGGTGTGTGCATGACACTCTCATCCAGATAAAGAAGGACAAAGTCAGTCGTAGAAGTTTTACAATGAAGCTTTTAAAACTGATCCCCATATTACTGTTTTGCTTCTTATTGTGGATAATAGTACAACATCTAACCGGCTGA 918 0.3867 MNHAPSQVMNVDHDVTLQEVQEYFAYYIVKDRLGIVASAHTVFADRDPEKAMSPACIELAKLHSIAVDFAKSGVPAEIPQHLRVEEYPDFMEKPDKPSYQSNSIIGKLYREVKNVAQHKSLTKPFTRKVARQSYDRDMKIDGFEKYTAIACEYKNMYDFKLGNLMDYYGIETEAEIISGNILKMSKSFNERKDLEGINHAVMSLRKEARSWFDVMINKSNSQGDNAHAIASAWYHVTYHPSYWGCYNQGLNRDHFLSFPWCVHDTLIQIKKDKVSRRSFTMKLLKLIPILLFCFLLWIIVQHLTG 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1139 305 PANTHER RNA-DEPENDENT RNA POLYMERASE 1 293 - -
Ssu2g1139 305 PANTHER RNA-DEPENDENT RNA POLYMERASE 1 293 IPR007855 GO:0003968
Ssu2g1139 305 Pfam RNA dependent RNA polymerase 6 112 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1139 Ssu-Chr2 51729717 51731449 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1139 2 51729717 51731449 Ssu2g1139 2 51729717 51731449 ECH