Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1133 ATGGTGTCAAAGTCCTATTCAAACCTATTGGAGTTGGCCTCTGGAGAGGCTCCATCGTTTGGGTACATGAACAGGAGAATTCCAAGGATTATGACTGTGGCTGGGTTGATATCTGACGTTGATGATGACCCAGTGGAGAGTGTGTGCTCTGATCCGTCTTCGTCGTCGGTGCACCGAGACCGGATAATCATGGTGGCTAATCAGCTCCCTATAAGGGCTCAGAGGAGGCCAGATGGGAATAGGAATTGTTGGTCTTTTGAGTGGGATGAGAATGCACTTCTTCAGCTGAAAGATGGGTTAGGGGATGATGATATTGAGGTTATTTATGTTGGATGTCTTAAGGAGGAGGTGCATCCAAGTGAACAGGATGAGGTTTCACTGCTACTTCTTGAGACCTACAAGTGTGTCCCAACTTTTCTCCCACCTGACCAGTTTACTAGGTACTATCATGGTTTTTGCAAACAGCAGTTGTGGCCACTGTTTCATTACATGCTGCCCTTGTCTCCAGAACTTGGTGGCCGGTTTAATAGGTCACTGTGGCAGGCTTATGTGTCGGTCAATAAAATTTTTGCAGATAGGATTATGGAAGTTATTAATCCTGAAGATGATTATGTGTGGATACATGATTATCATCTGATGGTGTTACCAACTTTCTTGAGGAAGAGATTCAACAGGGTGAAGCTGGGGTTCTTCCTTCATAGCCCATTCCCTTCGTcagaaatatataaaacattgcCTGTTAGGGAAGAGATCTTGAGAGCCCTCCTTAATTCGGATTTGATCGGCTTCCACACCTTTGATTATGCGCGGCATTTCCTCTCCTGTTGTAGCAGGATGCTTGGCCTTACCTACGAATCTAAGCGAGGTTATATTGGGATTGAGTACTATGGTAGGACTGTTAGTATCAAAATTCTTCCTGTTGGTATTCACATGGGTCAGCTTCAGTCGGTTTTGAGGCAGCCTGAAACTGAAGAAAAAGTTTGTGAGCTCATTAGGCAGTTTTCTGATCAAGGCAGGACATTGTTGCTTGGGGTGGATGACATGGATATTTTCAAGGGAATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTCAGTCAGCACCCTGAGTATCAGGGGAAGGTAGTTCTGGTCCAGATAGCTAATCCTGCAAGGGGACGAGGGAAAGATGTGAAAGAAGTGCAAGCCGAGACGAAGACCACGGTAAAACGGATTAATGAAACATTTGGGGAACCCGGGTATGATCCTGTCATTCTGATTGAGGAGCCTCTCAAGTTTTATGAGAGAGTTGCTTACTATGTTGTTGCGGAGTGTTGTTTAGTCACTGCAGTAAGGGATGGAATGAATCTCATACCTTATGAATATATCATCAGTCGTCAAGGAAATGAAACAGTGGATAAAGTTTTGGGTCTAACTTCCTCCCCTAAGAAGAAAAGCATGTTAGTTGTGTCTGAATTCATTGGCTGCTCCCCATCTTTAAGTGGAGCAATCAGAGTGAACCCATGGAATATTGATGCAGTAGCTGATGCAATGGACTCTGCACTCGAAATGGCTGATTCAGAGAAAGAGCTTAGGCATGAAAAGCATTATAGATATGTTAGTACTCACGATGTTGGTTACTGGGCTCGAAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGTGATCATGTGCGGCGAAGGTGGTGGGGGATTGGGTTTGGGTTAAGCTTTAGAGTTGTTGCACTTGATCCAAACTTCAAGAAGCTCTCAATGGAGCACATAGTTTCAGCTTACAAGCGGACAACAACTAGGGCAATCCTTCTAGACTATGATGGTACACTAATGCCTCAAGGGTCCATTGATAAGAGTCCAAGCAGTAAATCCATTGAAATTCTTGGTAGTTTGTGTAGAGATAAGAACAACATGGTTTTCCTTGTTAGTGCTAGAAAGCGAAAGGATCTTTCTGATTGGTTTTCTCCTTGTGAGAATCTGGGAATTGCGGCTGAGCATGGTTACTTTCTAAGAATGAAGCAAGATGAAGAGTGGGAAACACATGTTGCTGCAACAGACTGTAGTTGGAAACAAATTGCAGAACCTGTAATGAAACTTTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACTGCACTTGTTTGGTGCTATGAGGATGCAGATCCAGACTTTGGATCATGCCAGGCCAAGGAACTTCTTGATCATCTTGAGAGTGTGCTTGCAAATGAACCAGTAACAGTCAAGAGTGGCCAGAGTAATGTAGAGGTTAAACCACAGGGTGTGAGCAAGGGACTAGTGGCCAAACGACTACTTTCTGCCATGCAAGAAAAGGGAATGTGCCCTGATTTTGTTTTGTGTATAGGAGATGACAGGTCTGATGAAGACATGTTTGAGGTAATCACCAGTTCAATGGGCGGTCCGATCGCGCCACGGGCCGAAGTATTTGCGTGCACTGTTTGTCGAAAACCCAGTAAGGCTAAGTACTATCTGGATGATACAGCCGACATAGTGAGATTGCTTCAGGGCTTGGCCTGTGTTTCAGAacaaatagtttcattttcagAACAGAGAGTTTGTTAA 2580 0.4364 MVSKSYSNLLELASGEAPSFGYMNRRIPRIMTVAGLISDVDDDPVESVCSDPSSSSVHRDRIIMVANQLPIRAQRRPDGNRNCWSFEWDENALLQLKDGLGDDDIEVIYVGCLKEEVHPSEQDEVSLLLLETYKCVPTFLPPDQFTRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPVREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLRQPETEEKVCELIRQFSDQGRTLLLGVDDMDIFKGISLKLLAMEQLLSQHPEYQGKVVLVQIANPARGRGKDVKEVQAETKTTVKRINETFGEPGYDPVILIEEPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNETVDKVLGLTSSPKKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKELRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQGSIDKSPSSKSIEILGSLCRDKNNMVFLVSARKRKDLSDWFSPCENLGIAAEHGYFLRMKQDEEWETHVAATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQSNVEVKPQGVSKGLVAKRLLSAMQEKGMCPDFVLCIGDDRSDEDMFEVITSSMGGPIAPRAEVFACTVCRKPSKAKYYLDDTADIVRLLQGLACVSEQIVSFSEQRVC 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1133 859 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 553 - -
Ssu2g1133 859 Pfam Trehalose-phosphatase 600 833 IPR003337 GO:0003824|GO:0005992
Ssu2g1133 859 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 599 800 IPR006379 -
Ssu2g1133 859 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 850 IPR001830 GO:0003824|GO:0005992
Ssu2g1133 859 CDD HAD_TPP 598 838 - -
Ssu2g1133 859 TIGRFAM T6PP: trehalose-phosphatase 596 843 IPR003337 GO:0003824|GO:0005992
Ssu2g1133 859 Gene3D Glycogen Phosphorylase B; 316 534 - -
Ssu2g1133 859 Gene3D Glycogen Phosphorylase B; 53 315 - -
Ssu2g1133 859 CDD GT20_TPS 61 550 IPR001830 GO:0003824|GO:0005992
Ssu2g1133 859 SUPERFAMILY HAD-like 597 844 IPR036412 -
Ssu2g1133 859 Pfam Glycosyltransferase family 20 61 550 IPR001830 GO:0003824|GO:0005992
Ssu2g1133 859 Gene3D - 729 856 IPR023214 -
Ssu2g1133 859 Gene3D - 596 728 IPR023214 -
Ssu2g1133 859 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1133 Ssu-Chr2 51571827 51575139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1133 1 851 Trehalose Biosynthesis Gene Families AT1G68020 80.578 0.0 1449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1133 2 51571827 51575139 Ssu2g1133 2 51571827 51575139 ECH