Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1131 atggAAGCTAGACAACTTGGAGAAAATGGAGGGAGAAAGGGGGTTGAGGGAAGTGatgcagagaaagaaaatgaagaggtTCTAAAGAAGATTATTGCAAGTCATCCTTTGTATGAAGTTTTGATTGAATCCCACATCAACTGCCTGAAGGTGGGATTAAGCGGAGCTGGAGAGTTTGATGCAACAAGTGCTGCATGGAAGAAGCTGGTCGACTCGAAGTCCAAAGCAACTTCTAGTCCAAACACTTCAGAGTTAGATCACTTCATGGAAGCGTATTGTATGGCACTGAGCAAGCTCAAGGAAGCGATAGAGGAaccaacaaaagaaacaaatgcTTTCATCAGAGCTACGTATCTTCAACTAAAGGAACTCAATGAACTGAGTGACCCATAA 393 0.3817 MEARQLGENGGRKGVEGSDAEKENEEVLKKIIASHPLYEVLIESHINCLKVGLSGAGEFDATSAAWKKLVDSKSKATSSPNTSELDHFMEAYCMALSKLKEAIEEPTKETNAFIRATYLQLKELNELSDP 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1131 130 Pfam KNOX2 domain 83 124 IPR005541 GO:0003677|GO:0005634
Ssu2g1131 130 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 13 122 - -
Ssu2g1131 130 PANTHER FUSED COMPOUND LEAF 1 13 122 - -
Ssu2g1131 130 Pfam KNOX1 domain 28 52 IPR005540 GO:0003677|GO:0005634
Ssu2g1131 130 SMART KNOX2_2 75 126 IPR005541 GO:0003677|GO:0005634
Ssu2g1131 130 MobiDBLite consensus disorder prediction 1 23 - -
Ssu2g1131 130 SMART KNOX1_2 26 68 IPR005540 GO:0003677|GO:0005634
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1131 26 124 Homeobox Transcription Factor Family AT4G08150 34.951 8.77e-13 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1131 2 51493599 51495784 Ssu2g1131 2 51493599 51495784 ECH