Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1128 ATGATGGGGCAGAATCGTTTAccaaaggaaaggaaaagagatTGGCTTGGTGCCCTTTTGAAGAGCAGCTTTGGATGTTGTGAAGACCACAAAGACATCAGGTTTAATGAGAAGAATGTGTTCTGCATAGACTGCGTAGCTGGCTTGTGTAGGCACTGCAAGGAAGCTCATTCCCTCCATCGAAGGTTTCAGATATACAAATATTCCTATCAGGATGTTGTGCGCCATTCTGAACTGCAGAAGTATTTTGATTGCTCAAATATTCAGACATATGTGTCCAATAATGAAAAGATTGTGCATCTCAGACCCCGAACTTCATCCAAAGAATTCAAGCAAACAAGAAGATCTAAGTTTGATAATCTATGCCCTGGGTCTAATGCCAAAGAAGCCAAAGTAGCAACACCTCCAAAGTGGGGTGGTACTTGTGAAGAATGTGGAAAGCATTTACAAGATGAGCGCAATCGATTCTGCTCCATTACATGCAAGATCTCAGTGCTTCCACAAAACCAAGGTCTTCCCATTGAAGGAATTGCAGGCCATTCCATAAAGAAAAAACACCATGCACAAAAGGTTTCAGAGGAGGGTGTTACTCAACATGATAACCAAAACTCAGAAACTGAGTCATCTATATCTGTAGCTGAGCCATATGAATGTTTTGAGGTTGTGAATCTCAGAAAGCGCCCAAGGAAAGCCACCCCTCAGAAATCATGTCATTTTGTCTTCCCTTATTGA 732 0.4071 MMGQNRLPKERKRDWLGALLKSSFGCCEDHKDIRFNEKNVFCIDCVAGLCRHCKEAHSLHRRFQIYKYSYQDVVRHSELQKYFDCSNIQTYVSNNEKIVHLRPRTSSKEFKQTRRSKFDNLCPGSNAKEAKVATPPKWGGTCEECGKHLQDERNRFCSITCKISVLPQNQGLPIEGIAGHSIKKKHHAQKVSEEGVTQHDNQNSETESSISVAEPYECFEVVNLRKRPRKATPQKSCHFVFPY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1128 243 Pfam PLATZ transcription factor 67 163 IPR006734 -
Ssu2g1128 243 MobiDBLite consensus disorder prediction 183 209 - -
Ssu2g1128 243 ProSiteProfiles Zinc finger B-box type profile. 27 65 IPR000315 GO:0008270
Ssu2g1128 243 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 235 - -
Ssu2g1128 243 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 235 - -
Ssu2g1128 243 MobiDBLite consensus disorder prediction 195 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1128 Ssu-Chr2 51420399 51422168 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ssu2g1128 PLATZ 1.2e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1128 2 51420399 51422168 Ssu2g1128 2 51420399 51422168 ECH