Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1113 ATGGCCGTCACATTCTTCTCTCACTTGTCACTTCTTCAGCCCaacccttctctctctctctcaccccCTCGCTtcttccctcattctctcaGCAACGTCCACAACCCCTCCCTTACTGGTGTGGCTTCTGTGGCCAAGAGGGCAAATGGGGTGGTGCCAAAGGCCACCTTGGATGCCTTGGAGGCCAATTCGAGTCTCCCCATTTCGGTTAAGAAGTCCAACAAGAACCCCATTGTTGTTATTGACAACTATGACAGCTTCACCTATAATCTTTGCCAGACAAATGCGGTTGATGCGGCAGCAGTGGGTCACGGAGAACCTCAAGATTCAGGCATATCTTTGCAAACGGTTTTGGAACTTGGACCAACTGTACCATTGTTTGGTGTGTGCATGGGTTTGCAGTGCATTGGAGAGGCTTTTGGAGGGAAGATTGTCCGCTCTCCTTGTGGTGTCATGCATGGGAAAAGCTCTATGGTTTACTATGATGAGAAAGGAGAAGATGGAGTACTTGCTGGACTATCAAATCCTTTCTTGGCTGGTAGATATCACAGCCTTGTAATTGATAAAGAGAGCTTTCCTGATGAAGAACTTGAGGTAACAGCCTGGACAGAAGATGGTCTTATAATGGCTGCTCGTCATAAGAAATATAAGCATCTACAGGGAGTTCAGTTTCATCCAGAGAGCATTATAACCCCTGAAGGCAAGACAATTGTCCGTAATTTTGTCAAGCTTATAGAGAAAAGGGAGGCTGGTGGTTCTTGA 762 0.4396 MAVTFFSHLSLLQPNPSLSLSPPRFFPHSLSNVHNPSLTGVASVAKRANGVVPKATLDALEANSSLPISVKKSNKNPIVVIDNYDSFTYNLCQTNAVDAAAVGHGEPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPCGVMHGKSSMVYYDEKGEDGVLAGLSNPFLAGRYHSLVIDKESFPDEELEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITPEGKTIVRNFVKLIEKREAGGS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1113 253 PANTHER ANTHRANILATE SYNTHASE BETA SUBUNIT 1, CHLOROPLASTIC 34 94 - -
Ssu2g1113 253 TIGRFAM trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 102 243 IPR006221 -
Ssu2g1113 253 CDD GATase1_Anthranilate_Synthase 78 242 IPR006221 -
Ssu2g1113 253 PRINTS Anthranilate synthase component II signature 78 92 - -
Ssu2g1113 253 PRINTS Anthranilate synthase component II signature 174 186 - -
Ssu2g1113 253 PRINTS Anthranilate synthase component II signature 221 234 - -
Ssu2g1113 253 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 101 251 - -
Ssu2g1113 253 PANTHER ANTHRANILATE SYNTHASE BETA SUBUNIT 1, CHLOROPLASTIC 101 251 - -
Ssu2g1113 253 Gene3D - 76 247 IPR029062 -
Ssu2g1113 253 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 34 94 - -
Ssu2g1113 253 Pfam Glutamine amidotransferase class-I 103 242 IPR017926 -
Ssu2g1113 253 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 77 251 - -
Ssu2g1113 253 SUPERFAMILY Class I glutamine amidotransferase-like 77 247 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1113 Ssu-Chr2 51052170 51056434 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1113 2 51052170 51056434 Ssu2g1113 2 51052170 51056434 ECH