Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00327 ATGACCAAAAGGGGTATCGCACGCACATTCTTCACAATGTGTGTGTTTTTTTGCGAGACCTTGTTCTTCCCTCGGTTTTCAGAGTGTTCGAGCACGAGCGTGTTACTGTTCAGCGGGTGCGCGCAGCAACGCTACACCCCAAACTCGCCGTACGAGTCGAACCTGGACTCGCTACTCACCTCGCTGGTGAACTCGGCGACGTACTCGTCGTACAATAACTTCACGGTGGTGGGGTCCACGCAACAGGACGCGGTGTCCGGCCTCTATCAGTGTCGCGGCGACCTCGCTATGCCGGACTGTGCAGCCTGCGTGGCGCGGGCCGTTACGCGCGCTGGTGACATCTGCCGTGGGCTGTGCGGCGGCGCGGTGCAGCTCGACGGCTGCTTCGTGAAGTACGACAACATGACATTCCTTGGCGTGGAAGACAAGACGGTGGTGCTGAAGAAGTGCGGGCCCTCCGTGGGGTACAACCCCGACGCCATGGGGAGCCGCGACGCCGTACTGGCCGGGCTCGCCGCCGCGGGGGGGAACTTCAGGGTGGGCGGTTCCGGTGGGGTGCGCGGCATGGCACAGTGTACAGGTGACCTAAGCTACGGCGAGTGCCAGGACTGCTTGGCGGAGGCCATCTCGCGGCTGAAGGGCGACTGCGGCACGGCGGATTACGGGGACATGTTCTTGGGGAAGTGTTATGCGCGGTATTCCACCGGTGGGGCCCACGATGAGTCCAAGGCCCACGGCGAATCAGGTCACGGAGGCGTAAAGACATTTGCTATAATTATTGGATCATTGGCAGGAGTGGCTATACTTATTATTTTCCTTGCTTTCATGACCAAAATTTGTGGGAGACAGGGTAAATAA 858 0.5967 MTKRGIARTFFTMCVFFCETLFFPRFSECSSTSVLLFSGCAQQRYTPNSPYESNLDSLLTSLVNSATYSSYNNFTVVGSTQQDAVSGLYQCRGDLAMPDCAACVARAVTRAGDICRGLCGGAVQLDGCFVKYDNMTFLGVEDKTVVLKKCGPSVGYNPDAMGSRDAVLAGLAAAGGNFRVGGSGGVRGMAQCTGDLSYGECQDCLAEAISRLKGDCGTADYGDMFLGKCYARYSTGGAHDESKAHGESGHGGVKTFAIIIGSLAGVAILIIFLAFMTKICGRQGK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00327 285 FunFam cysteine-rich repeat secretory protein 3 32 137 - -
Spst8g00327 285 FunFam Cysteine-rich repeat secretory protein 60 158 236 - -
Spst8g00327 285 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 280 - -
Spst8g00327 285 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Spst8g00327 285 ProSiteProfiles Gnk2-homologous domain profile. 138 238 IPR002902 -
Spst8g00327 285 Gene3D - 32 137 IPR038408 -
Spst8g00327 285 Gene3D - 161 236 IPR038408 -
Spst8g00327 285 Pfam Salt stress response/antifungal 40 134 IPR002902 -
Spst8g00327 285 Pfam Salt stress response/antifungal 183 235 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00327 Spst-Chr8 2950003 2951581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00327 26 285 Receptor kinase-like Gene Family AT4G23280 26.056 4.63e-15 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00327 8 2950003 2951581 Spst1g02274 1 31479232 31480403 PCT