Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00324 ATGGCTGTGCATTTTCTTCTCCTGCTTTTTGCAGTGTCACTTGTTGCAGCTGATGATGAAGCGTTTATTGGAGTCAACATTGGAACAGATCTCTCTGATATGCCACACCCTACTCAAGTCGTGGCTCTACTTAAAGCCCAGCAAATCCGGCATGTTCGGTTGTATGATGCCGACCAAGCTATGCTCCTTGCACTTGCAAAGACAGGCATTCAAGTTGTTGTGACTGTTCCTAATGAAGAGCTCCTAGCAATTGGTCAATCAAATTCCACGGCTGCCAACTGGGTTTCCCGCAATGTGGTAGCACATTATCCAGCCACCAATATCACAACCATTTGTGTTGGTTCTGATGTTTTAACTTCCCTCCCAAATGTGGCAAAACTACTTGTTAGCGCCATTAAGTACATTCATTCTGCCCTTGTGGCATCAAATCTTGATCGCCAAGTTAAAGTTTCGACACCCCTTTCTTCTTCCATCATCCTTGATTCATTTCCACCTTCTCAGGCTTTCTTTAACCGTTCACTCAATCCAGTTTTAGTCCCTCTTCTTGATTTTTTGCAATCCACTGGATCTTATCTGATGCTAAACATTTACCCTTACTATGACTACATGCAATCTAATGGAGTGATTCCATTAGACTATGCACTCTTCAAAACTCTCCCTCCAAACAAAGAAGCTGTCGATTCAAATACCCTTCTTCACTACACCAATGTCTTTGATGCCATGGTTGATGCTGCATACTTTGCCATGGCTTTTCTGAACTACACCAATATTCCTGTAGTAGTGACCGAGTCAGGGTGGCCTTCAAAAGGTGGCTCCAACGAGCCTGATGCAACGGTAGACAATGCTAACACGTACAACAGCAATTTGATCAAGCATGTGTTTAACAAAACCGGAACTCCCAAACATCCTGGAATTGCTGTCAGTACTTACATCTATGAGCTCTACAATGAGGATACGAAGCCGGGGCCATTATCTGAGAAAAACTGGGGACTATTTGATGCAAATGGAACACCTATCTACATTCTACACTTGACAGAATCAGGGGCAGTCCTAGCAAATGATACCAGTAATCAAACCTTCTGCATTGCCAAGGATGGTGCTGACCCGAAGATGCTGCAGGCTGCATTAGATTGGGCATGTGGACCAGGCAAGGTTGAATGCTCTCCATTGCTGCAAGGACAACCATGCTATGAACCAGACAATGTGATTGCACATGCAAATTATGCTTTTGACACTTACTATCATAAGATGGGAAAAACTCTCGATGCGTGTGACTTCAATGGAGTAGCTACAATCTCTACCTCAGATCCAAGTCATGGTTCTTGTTTATTTCCTGGAAGTCTTGGCAAAAATGGCACCTTAGGTAACTTCACAGCTCCATCCATGAATTCTACAAATTCAGATTCCTCAGCCTACAACCTTGGCAACTGTGACTTGAGAATTAGAAGCCTTCTAATGGTAACAGGATTTCTATTATGGGGAGTGGTTTTGCTATAA 1497 0.4329 MAVHFLLLLFAVSLVAADDEAFIGVNIGTDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLLALAKTGIQVVVTVPNEELLAIGQSNSTAANWVSRNVVAHYPATNITTICVGSDVLTSLPNVAKLLVSAIKYIHSALVASNLDRQVKVSTPLSSSIILDSFPPSQAFFNRSLNPVLVPLLDFLQSTGSYLMLNIYPYYDYMQSNGVIPLDYALFKTLPPNKEAVDSNTLLHYTNVFDAMVDAAYFAMAFLNYTNIPVVVTESGWPSKGGSNEPDATVDNANTYNSNLIKHVFNKTGTPKHPGIAVSTYIYELYNEDTKPGPLSEKNWGLFDANGTPIYILHLTESGAVLANDTSNQTFCIAKDGADPKMLQAALDWACGPGKVECSPLLQGQPCYEPDNVIAHANYAFDTYYHKMGKTLDACDFNGVATISTSDPSHGSCLFPGSLGKNGTLGNFTAPSMNSTNSDSSAYNLGNCDLRIRSLLMVTGFLLWGVVLL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00324 498 SMART X8_cls 359 444 IPR012946 -
Spst8g00324 498 Gene3D Glycosidases 22 349 - -
Spst8g00324 498 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Spst8g00324 498 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Spst8g00324 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 432 IPR044965 GO:0004553|GO:0005975
Spst8g00324 498 Pfam X8 domain 360 431 IPR012946 -
Spst8g00324 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Spst8g00324 498 FunFam Glucan endo-1,3-beta-glucosidase 4 354 448 - -
Spst8g00324 498 Gene3D - 353 444 - -
Spst8g00324 498 FunFam Glucan endo-1,3-beta-glucosidase 3 22 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00324 Spst-Chr8 2917229 2919887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00324 17 467 Glycoside Hydrolase AT1G66250 75.938 0.0 736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00324 8 2917229 2919887 Spst8g00324 8 2917229 2919887 ECH
Spst8g00324 8 2917229 2919887 Spst1g02271 1 31406171 31409114 PCT