Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01395 ATGGAATCGGTGAAGCCAGTGGCCTTGACCCCGCGAAAGAAGCTGGCGCGCAGTTTTGCCAAGGTTCTTCATGTCAAAGCACTGATTGGGATTGCCTCAGTTGATGGGTTGAAGAATGTTATATCTGATGCAAATCTCAAGGATGAAGGGAACATGGAGAAGAGTAAGAGTTCACTGAATTGGTCTGATTCTTTCAACGAAGATGATGATGATGAGGAGCTTCAGGAGAAAATGGCCAATGAAGCTCTTCTAGCAAAGCTTTTTGCTAGCATTTCAACTGTTAAAGGTGCATATGCCGAGTTGCAATATTCCCAGTCACCTTTTGACCCTGATGGAATTGAAGCTGCTGATCAATTGCTAGTGTCTGAGTTGAAGAACTTGTCTGAGCTCAAGCAATGTTACTTGAAGAAACAGTTTGATCCTTCGCCTGAGACGGCAATTCTTGAGGCTGAATTCAAGGAGCTGCAGGGTGTGATCAAAACGTATGAGGTCATGGGGAAGAAGCTAGAGTCACAGGTGCGGCTCAAGGATTCTGAGATTGTTTTTCTCAAGGAGAAGTTAGAGGAAGCTAATAGGCATAACAAGGCAATTGAGAAGAGATTAAATCAAAGCGGTCAACTAGGTGTGCTTGATAATCTTCACATATCAGGGTTAAGTCCTAGCCATTTTATCACAGTTCTTCGTCACGCAGTTAGGTCTGTTCGCAACTTCGTGAGGGTGATTGTGGACGAGATGAGATCTGCAGGTTGGGATGTGGATGCGGCAGTCGATGCCATTGAGCAGAATGTGGTTTACTTGGCAGAAGATCACAAGTGTTTCGCAATAGAGGCCTTTGTTTGCAGGGAGATGTTTGATGCTTTCCACTTCCCTAACTTTTCCCTGTCAAGTGAGTCTCTCCCTGATAGAAGCAGGAGGCAACAGTGGTTCTTTGGGAGGTTCAATGAGATGAAATCCATGAAAGCAAAGGACTTCCTTGCTGGGAAGCCAAGATCATCATTTGCAAAGTTTTGCCGGGTGAAGTACTTGAAACTTGTTCATCCCAAGATGGAGTCATCATTTTTTGGTAACATGAATCACAGGAACCTTGTGAATGCTGGAGAGTTTCCAGACACTCCATTCTTCACATCATTTGCTGAGATGGCCAAGAGGGTGTGGCTTCTACACTGCCTGGCCTTCTCTTTTGAGCCCCAGGCCTCAATCTTCCAAGTGGGAAAAGGGTGTAGATTCTCTGATGTGTACATGGAAAGTGTGAATGATGAAATCTTCCTCTATTCAGAAGTGGAATCAGATCCACAAGTTGCTTTCACAGTAGTTCCAGGGTTTAGGATTGGTAAAACTGTTATCCAGTGTCAAGTGTACCTCTCACAGCACCAGAGCAAGGTAAAAAAACTCACTTCCACAAAGCAAAGGTAG 1413 0.4459 MESVKPVALTPRKKLARSFAKVLHVKALIGIASVDGLKNVISDANLKDEGNMEKSKSSLNWSDSFNEDDDDEELQEKMANEALLAKLFASISTVKGAYAELQYSQSPFDPDGIEAADQLLVSELKNLSELKQCYLKKQFDPSPETAILEAEFKELQGVIKTYEVMGKKLESQVRLKDSEIVFLKEKLEEANRHNKAIEKRLNQSGQLGVLDNLHISGLSPSHFITVLRHAVRSVRNFVRVIVDEMRSAGWDVDAAVDAIEQNVVYLAEDHKCFAIEAFVCREMFDAFHFPNFSLSSESLPDRSRRQQWFFGRFNEMKSMKAKDFLAGKPRSSFAKFCRVKYLKLVHPKMESSFFGNMNHRNLVNAGEFPDTPFFTSFAEMAKRVWLLHCLAFSFEPQASIFQVGKGCRFSDVYMESVNDEIFLYSEVESDPQVAFTVVPGFRIGKTVIQCQVYLSQHQSKVKKLTSTKQR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01395 470 Coils Coil 180 207 - -
Spst5g01395 470 Coils Coil 454 470 - -
Spst5g01395 470 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 13 455 IPR040225 GO:0009639|GO:0009959
Spst5g01395 470 MobiDBLite consensus disorder prediction 50 70 - -
Spst5g01395 470 Pfam Plant protein of unknown function (DUF641) 76 200 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01395 Spst-Chr5 38147160 38148572 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01395 5 38147160 38148572 Spst11g00529 11 27252671 27255883 ECH
Spst5g01395 5 38147160 38148572 Spst5g01395 5 38147160 38148572 ECH