Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00938 ATGATGGCTACCCGTAACATTGAGAAGATGGCCTCAATTGATGCTCAGTTGAGGTTGCTGGCACCACGCAAGGTCTCTGATGATGACAAACTGGTTGAGTATGATGCTCTTTTGTTGGACCGTTTCCTTGACATTCTTCAGGATTTGCATGGCGAAGATATCAGACAAACGGTACTGTCAAATCTTTTGTTGCATTTGAAAAAGATGGGTTTTTTAGCTCAACTTCATGGATTTATGAAACCCCAGTTCAACTTTTCTGAGTACGAAGGAGAGCATCGACCTGAAAAATTGGAGGAACTTGGGAATATGCTGACTGGTCTTGATGCAGGGGATTCAATTGTTATTGCCAAGTCATTTTCTCACATGCTCAATCTGGCCAACTTGGCAGAAGAGGTTCAAATTGCGTACCGAAGAAGGATCAAGTTATTGAAGAAGGGTGATTTTGCGGATGAAAACTCTGCCATGACCGAGTCTGACATTGAAGAGACCTTGAAGAGGCTCGTGACTCAACTGAAGAAGACCCCCCAGGAAATCTTTGATGCTTTGAAGAATCAAACTGTGGATTTGGTCCTCACTGCTCATCCTACTCAGTCTGTTCGCAGATCTTTGCTGCAAAAGCACGGAAGGATAAGGAATTGTTTGACACAATTATATGCCAAAGACATAACACCAGATGATAAGCAGGAACTTGATGAGGCTTTACAAAGAGAGATTCAAGCTGCATTTCGCACAGATGAGATTCGAAGGACTCCTCCTACACCACAAGATGAGATGAGGGCAGGAATGAGCTACTTTCATGAAACAATTTGGAAAGGTGTACCAAAGTTTCTGCGCCGGGTTGATACAGCTCTGAAGAACATCGGAATAAATGAACGTGTACCGTATAATGCTCCTGTTATTCAGTTCTCTTCTTGGATGGGAGGAGATCGTGATGGTAATCCTAGAGTAACCCCTGAAGTTACAAGGGATGTGTGTTTGCTGGCTAGAATGATGGCTGCTAATATGTACTTCTCTCAGATAGAGGATCTCATGTTTGAGTTGTCTATGTGGCGTTGCACTGACGAGCTCCGTGTTCGTGCTCATGAACTCCATAGGTCCTCAAAGAGAGATGCAAAACATTACATAGTCTCAATTGATGCAGAGTTTTGGAAACAGATTCCTCCAAATGAGCCATATCGTGTTATTCTTGGTGATGTCAGAGACAAACTGTATAACACACGTGAACGTGCTCGCCAGTTATTAGCCAATGGAACCTCCGATATTGCAGAGGAGACAACCTTCACTAATGTTGAGCAGTACCTAGATCACATTCCCGAGTTCCTGGAGCCTCTTGAGCTATGCTATAGGTCACTCTGTGCATGTGGTGACAGACCAATAGCAGATGGAAGCCTCCTCGATTTCCTGCGGCAAGTTTCCACATTTGGACTCTCACTTGTGAGGCTTGACATCCGTCAAGAGTCAGATAGGCACACTGATGTTATGGATGCTATCACAAAACACTTGGAAATTGGATCATACAGAGAGTGGCCTGAGGAAAAGAGGCAGGAGTGGCTCTTGTCTGAACTCAGTGGAAAACGCCCTCTCTTTGGCCATGACCTTCCCAAAACAGAAGAAATCACTGATGTTTTGGAAACCTTCCATGTCATTTCAGAGCTTCCCCCAGACAATTTTGGTGCCTACATCATATCAATGGCCACAGCCCCATCTGATGTGCTTGCTGTTGAGCTTTTACAACGTGAGTGCCATGTGAAGCAGCCACTAAGGGTGGTGCCACTGTTTGAAAAGCTTGCTGATCTTGAGGCTGCTCCGGCCGCCGTGGCGCGACTTTTCTCCATAGATTGGTACAGAAACCGCATCAATGGGACGCAAGAAGTTATGATAGGGTACTCAGACTCAGGAAAAGATGCTGGCCGTCTTTCAGCTGCTTGGGCGCTTTACAAGGCTCAAGAGGAACTTGTGAAGGTTTCTAAGGAGTTTGGTGTGAAGCTTACAATGTTTCACGGGAGAGGCGGGACTGTTGGAAGAGGAGGAGGACCGACTCATCTTGCTATTTTGTCTCAGCCACCAGATACCATTCATGGCTCACTTCGCGTAACGGTTCAGGGTGAAGTCATTGAACAGTCTTTTGGAGAGGAGCACTTGTGCTTTAGGACACTTCAAAGATTCACTGCAGCTACACTTGAGCATGGCATGCATCCTCCTGTGTCACCAAAACCGGCATGGCGCGCCCTCATGGATGAGATGGCTGTCATTGCTACTCAGGAGTATCGCTCTGTTGTTTTCAAAGAGCCTCGTTTTGTTGAGTATTTCAGATGCGCAACTCCTGAGTTGGAGTATGGAAGAATGAACATTGGCAGTCGTCCATCAAAGCGAAAGCCAAGTGGAGGAATTGAATCTCTTCGTGCTATTCCTTGGATTTTTGCATGGACACAAACTAGGTTTCATTTGCCAGTGTGGCTGGGTTTTGGTGCAGCATTTAAGCATGTTGTTGAGAAAGATCCAAAGAATCTCCAAATACTTCAGGATATGTACAACCAATGGCCTTTCTTCAGGGTCACCCTTGACTTGGTTGAGATGGTGTTTGCCAAGGGAGACCCCGGGATTGCAGCCCTATTTGACAAACTCCTAGTGTCAGAAGAGCTACGTCCATTCGGAGAGAGCTTAAGAGCTAAATACGAAGAAGCCAAGAACTTTCTCCTCCTGGTTGCTGGGCACAAGGATCTTCTTGAAGGAGACCCCTACCTGAAGCAAAGACTTCGACTTCGTGACTCATACATCACGACCCTGAATGTGTTGCAAGCCTACACATTGAAGCGAATCCGTGATCCTGACTACCATGTGAAGTTGAGGCCACACTTGTCAAAGGACTACATGGAATCAAGCAAGCCAGCAGCAGAACTTGTTAAACTTAACCCCAAAAGCGAGTATGCACCTGGCCTTGAAGACACCCTTATTTTGACAATGAAGGGTATTGCTGCTGGCATGCAAAATACCGGTTAA 3000 0.458 MMATRNIEKMASIDAQLRLLAPRKVSDDDKLVEYDALLLDRFLDILQDLHGEDIRQTVLSNLLLHLKKMGFLAQLHGFMKPQFNFSEYEGEHRPEKLEELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAMTESDIEETLKRLVTQLKKTPQEIFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSQIEDLMFELSMWRCTDELRVRAHELHRSSKRDAKHYIVSIDAEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGTSDIAEETTFTNVEQYLDHIPEFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYREWPEEKRQEWLLSELSGKRPLFGHDLPKTEEITDVLETFHVISELPPDNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAAVARLFSIDWYRNRINGTQEVMIGYSDSGKDAGRLSAAWALYKAQEELVKVSKEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPAWRALMDEMAVIATQEYRSVVFKEPRFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVVEKDPKNLQILQDMYNQWPFFRVTLDLVEMVFAKGDPGIAALFDKLLVSEELRPFGESLRAKYEEAKNFLLLVAGHKDLLEGDPYLKQRLRLRDSYITTLNVLQAYTLKRIRDPDYHVKLRPHLSKDYMESSKPAAELVKLNPKSEYAPGLEDTLILTMKGIAAGMQNTG 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00938 999 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 190 201 IPR018129 -
Spst5g00938 999 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 625 637 IPR033129 -
Spst5g00938 999 Hamap Phosphoenolpyruvate carboxylase [ppc]. 25 999 IPR022805 GO:0006099|GO:0008964|GO:0015977
Spst5g00938 999 PRINTS Phosphoenolpyruvate carboxylase signature 242 258 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst5g00938 999 PRINTS Phosphoenolpyruvate carboxylase signature 797 823 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst5g00938 999 PRINTS Phosphoenolpyruvate carboxylase signature 474 494 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst5g00938 999 PRINTS Phosphoenolpyruvate carboxylase signature 665 694 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst5g00938 999 PRINTS Phosphoenolpyruvate carboxylase signature 623 643 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst5g00938 999 PRINTS Phosphoenolpyruvate carboxylase signature 302 317 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst5g00938 999 PRINTS Phosphoenolpyruvate carboxylase signature 189 202 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst5g00938 999 Pfam Phosphoenolpyruvate carboxylase 87 999 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst5g00938 999 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 5 999 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst5g00938 999 FunFam Phosphoenolpyruvate carboxylase 1 330 477 - -
Spst5g00938 999 Gene3D Phosphoenolpyruvate/pyruvate domain 330 477 - -
Spst5g00938 999 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 36 999 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00938 Spst-Chr5 8762445 8768830 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00938 5 8762445 8768830 Spst5g00938 5 8762445 8768830 ECH
Spst11g00546 11 27447510 27453959 Spst5g00938 5 8762445 8768830 PCT