Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00764 ATGGAGAGAGATTTCATGGGTCTCAACTCGAAAGAACCACTAGCTGTGGTCAAGAAGGAGATCAACGATGATGGCTACGAAGACTCTGGCATAGTTCCAGTCCTTCTTGGTTCCATTGCACAGTGGCCCTTCTCGAACAAAGTATCTGCCCTTCCACATTTGATGTCTTTCAAGGCTTCTCAAGATGATAAGACTAAGAACATAGTGTCTGATCCCATAACATCTGGGCTTTTATCTATCTTAAGTCAAGATGCAATTGAATCTAGTCAGAAACGCTTTGCTGGTGAACCCCAGAAATCTTTCAATCATGATGGGCACGGTGGTCGTCATTTTTCGCTGACTCCATATCCTGTACAACATGATACCAATTCTGTGAATCATCCTCATGATGTGAAGATGTTTTCAGTTCCCAATCAAGCAATTTCAGTTTCCTTGGGGAATCCATTCCTGAAGAATCATTTTGCAACTGCTGGTCATAATATGAATGGCACTGGTGTGATGCAGCCATTACTTGGGGGAATACCTGTTTCTGTTCCCCATTCAGCTCTTCCCAACGCTGGTGCTGTTGCTGGAATGATTCAATCATGTAACAGCGTGAAACCATCTCCACCTTCTGCCCAACTTACCATCTTCTATGCGGGAACTGTCAAGGTCTTTAATGATATCTCTGCTGAAAAGGCACAAGCTATCATGCTGTTGGCTGGCAATAGCTTATCTATAGCTCCTAACATGGCCCAGCCAAAAGTTCACGCGCCTGTCTCGAAGATGGCTGGTGGCGATGGTGTGCCTGTGAGTCAACCAGCGAATACACCACCCGGCTCTGGCCTTTCAAGCCCTTTATCTGTTTCTTCACATACTGGACTGCAGTCAGGGAGTGGCTCAACCAGCACTGATGAATTTCTTGCTTCTAAAACAACTGGAGTTCCCACTACTCCTGTTAGCAATGTGGACCCTCCAAAGGTAGTCAGTGCAACCACTATGTTGACATCAGCTGTACCTCAGGCTCGGAAAGCATCCTTGGCTCGATTTTTAGAAAAGCGCAAAGAAAGGGTGATGAGTGCAGCACCATATAATCTCAACAACAAGTCTGAAGAGTGTGCAGCTGCAGAATAA 1113 0.4555 MERDFMGLNSKEPLAVVKKEINDDGYEDSGIVPVLLGSIAQWPFSNKVSALPHLMSFKASQDDKTKNIVSDPITSGLLSILSQDAIESSQKRFAGEPQKSFNHDGHGGRHFSLTPYPVQHDTNSVNHPHDVKMFSVPNQAISVSLGNPFLKNHFATAGHNMNGTGVMQPLLGGIPVSVPHSALPNAGAVAGMIQSCNSVKPSPPSAQLTIFYAGTVKVFNDISAEKAQAIMLLAGNSLSIAPNMAQPKVHAPVSKMAGGDGVPVSQPANTPPGSGLSSPLSVSSHTGLQSGSGSTSTDEFLASKTTGVPTTPVSNVDPPKVVSATTMLTSAVPQARKASLARFLEKRKERVMSAAPYNLNNKSEECAAAE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00764 370 SMART tify_2 201 236 IPR010399 -
Spst3g00764 370 Pfam tify domain 202 235 IPR010399 -
Spst3g00764 370 MobiDBLite consensus disorder prediction 267 317 - -
Spst3g00764 370 MobiDBLite consensus disorder prediction 91 116 - -
Spst3g00764 370 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 144 367 IPR040390 -
Spst3g00764 370 ProSiteProfiles Tify domain profile. 201 236 IPR010399 -
Spst3g00764 370 MobiDBLite consensus disorder prediction 252 317 - -
Spst3g00764 370 Pfam Jas motif 333 357 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00764 Spst-Chr3 11218435 11221380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00764 42 366 Tify Gene Family AT3G17860 35.777 3.01e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Spst3g00764 tify 1.8e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00764 3 11218435 11221380 Spst3g00764 3 11218435 11221380 ECH