Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00763 ATGGGCGACATGAAAGACAAGGTTAAAGGGTTCATGAAAAAAGTGAACAACCCTTTCTCCTCTTCATCATCTGGCAAATTCAAGGGCCAAGGTAGAGTCCTCGGGTCATCTTCTACACCCGCCAATTCCAATCCCACCCCTCGCCCCATTCCTTCGCTCAGCCCTAATTCTAAACCCTCTTCAACCAATCCCAAACCCTCGTTCCACAATACGGAGTCCACTAGAAGCACTGAGAAGCCTCGCAAAGATGGTGATGGGTTTGACCCGTTTGATTCTTTGGTCACTAATTCCAACAGATCGCAAAACGGGTATTCGCTGAACGTCTATGAATGCCCCGTTTGTAAACAAGCCTTCGGATCCGAAGAAGCTGTGTCTGAACACGTGGATGATTGTTTGAGTAACCTTGTTGAGCGTGAGCCTATAGTCGATGATGGAAGCGGGGTTTCAGAGAGTGAAGTTGGGTCTAACACTAATGATGAATTGGAGGTTTGTGTTGGGACTTACGTTTCAGGGAATCCATCTGAGGGATCGGTTGATATTGTTCTCAAACTGTTGAGGAATATTGGTAGAGAACCTGAAAATGTGAAGTTTAGGAGGATCAGGATGAATAATCCCAAGATAAAAGAGGCTGTTGGTGATGTTGCTGGGGGAGTTGAGTTACTCAGTTTTCTCGGGTTTGAACTCAGGGAGGAGAATGGAGAGACATGGGCAGTGATGGAGGTTCCAAGAGAGGAGCAGATAAAATACATCAAGAAGGCAATTGGGTTACTGGAATCACAACTTGTACCACAAGAACCTCCAAAGAGAGAGGATTCGGCATCTACAAATTCTGCGCAGACGGGTGCGAAGGCCGAGCCAAAACCAGTCGACAGAGAGGTGAAGGTCTTCTTTGCTGTCCCTGAAAGTGTTGCAGCTAAAATTGAGCTACCAGATTCTTTCTATAGCCTTTCAGCTGAAGAGGTGAGAAGAGAAGCTGAGTTAAGGAAAAAAAAGATTGCAGATTCTCAGCTTTTAATCCCTAAGTCACTTAAAGAAAAGCAAGCAAAAGCTTCCAGGAGGAGATACACAAAAACTATTATTAGGATTCAATTTCCCGATGGAGTTGTACTTCAAGCTGTATTTGCTCCATGGGAACCAACCACTGCTCTCTATGAGTTTGTCAGCTCAGCACTAAAAGAACCAGGTTTGGAATTTGAGCTAATGCATCCTGTAGTTGTCCAACGGCGTGTGATCCCTCATTTTCCAAAACCAGGTGAAACTGCTAAAACAATAGAGGAAGAGGACCTGGTACCTTCAGCTCTAATTAAGTTCAAGCCCTTGGAAACTGATTCTATTGTTTTCACCGGTCTCAAAAATGAATTGCTTGAAATCAGTGAACCACTTGTAAATCGTTAA 1395 0.4437 MGDMKDKVKGFMKKVNNPFSSSSSGKFKGQGRVLGSSSTPANSNPTPRPIPSLSPNSKPSSTNPKPSFHNTESTRSTEKPRKDGDGFDPFDSLVTNSNRSQNGYSLNVYECPVCKQAFGSEEAVSEHVDDCLSNLVEREPIVDDGSGVSESEVGSNTNDELEVCVGTYVSGNPSEGSVDIVLKLLRNIGREPENVKFRRIRMNNPKIKEAVGDVAGGVELLSFLGFELREENGETWAVMEVPREEQIKYIKKAIGLLESQLVPQEPPKREDSASTNSAQTGAKAEPKPVDREVKVFFAVPESVAAKIELPDSFYSLSAEEVRREAELRKKKIADSQLLIPKSLKEKQAKASRRRYTKTIIRIQFPDGVVLQAVFAPWEPTTALYEFVSSALKEPGLEFELMHPVVVQRRVIPHFPKPGETAKTIEEEDLVPSALIKFKPLETDSIVFTGLKNELLEISEPLVNR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00763 464 Pfam PUB domain 175 248 IPR018997 -
Spst3g00763 464 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 463 - -
Spst3g00763 464 FunFam UBX domain-containing protein 6 347 438 - -
Spst3g00763 464 Gene3D Classic Zinc Finger 105 134 - -
Spst3g00763 464 MobiDBLite consensus disorder prediction 261 287 - -
Spst3g00763 464 FunFam Plant UBX domain-containing protein 2 170 256 - -
Spst3g00763 464 CDD PUB 174 259 - -
Spst3g00763 464 Gene3D - 170 259 - -
Spst3g00763 464 SUPERFAMILY Ubiquitin-like 325 437 IPR029071 -
Spst3g00763 464 SMART PGNneu 176 243 - -
Spst3g00763 464 MobiDBLite consensus disorder prediction 55 71 - -
Spst3g00763 464 Gene3D - 347 440 - -
Spst3g00763 464 ProSiteProfiles UBX domain profile. 353 437 IPR001012 GO:0005515
Spst3g00763 464 MobiDBLite consensus disorder prediction 15 43 - -
Spst3g00763 464 MobiDBLite consensus disorder prediction 72 88 - -
Spst3g00763 464 MobiDBLite consensus disorder prediction 1 94 - -
Spst3g00763 464 Pfam UBX domain 355 404 IPR001012 GO:0005515
Spst3g00763 464 SUPERFAMILY PUG domain-like 173 253 IPR036339 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00763 1 385 C2H2 Transcription Factor Family AT2G01650 55.335 2.38e-142 411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00763 3 11189144 11200324 Spst3g00763 3 11189144 11200324 ECH