Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00752 ATGGCCTGCTTGGTATCTCGCTCAGGAAGGGAATTGCAGAGGTACAACAACATGGGTGGCCGCCAAGTTGTTGGGTGCATACCTTACAGATATAAACAAGATGTAGATGGTAACATGAGTGAGGAATTGGAAGTACTGGTTGTTAGTTCACAGAAAGGTCAAAGATTGATGTTCCCTAAGGGAGGATGGGAACTTGATGAATCTGTAGAAGAAGCAGCTTGTAGAGAATCCCTTGAAGAAGCAGGAGTTTTGGGAATAATTGAGCATGAACTGGGGCAATGGAACTTCATTAGCAAAAGACATGGCATATACTATGAAGGACACATGTTCCCCATGTTTGTCAAGGAACAACTTGACACGTGGCCTGAGAAAAATTTACGGAGAAGAATATGGATGAACGTTGGTGAAGCTAGAGAAGCTTGTGAGCATTGGTGGATGAAGGAGGCATTAGATATATTGGTTCAAAGAATCGTGTCTTCACAACAACGAAAATAA 495 0.4242 MACLVSRSGRELQRYNNMGGRQVVGCIPYRYKQDVDGNMSEELEVLVVSSQKGQRLMFPKGGWELDESVEEAACRESLEEAGVLGIIEHELGQWNFISKRHGIYYEGHMFPMFVKEQLDTWPEKNLRRRIWMNVGEAREACEHWWMKEALDILVQRIVSSQQRK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00752 164 CDD Nudix_Hydrolase_9 22 147 IPR047198 GO:0016462
Spst3g00752 164 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Spst3g00752 164 FunFam Nudix hydrolase 17, mitochondrial 5 156 - -
Spst3g00752 164 Pfam NUDIX domain 42 147 IPR000086 -
Spst3g00752 164 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 157 - -
Spst3g00752 164 SUPERFAMILY Nudix 14 155 IPR015797 -
Spst3g00752 164 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 158 - -
Spst3g00752 164 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00752 Spst-Chr3 11067405 11068476 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00752 3 11067405 11068476 Spst3g00752 3 11067405 11068476 ECH