Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00746 ATGGCCGACGCTCTCTCGCTGATTCCGGCAGCCGTGCTTCGCAACCTTGCTGACAAGCTCTACGAGAAGCGTAAAAATGCTGCACTTGATATTGAGGGGATAGTGAAGCAGCTAGCTAGTGCTGGAGATCATGATAAAATAACGGCTGTGATCAATTTGTTGACTACAGAATTTACTTATTCACCACAAGCCAATCATCGGAAGGGAGGATTGATAGGATTAGCAGCAGCAACTGTTGGGTTGAGTTCTGAAGCAGCTCAGCATCTTGAGCAAATTGTGCCCCCTGTGTTAAATTCTTTCTCTGACCAAGATAGCAGAGTTCGATATTATGCTTGTGAAGCACTATACAATATTGCCAAGGTTGTGAGAGGGGATTTTATTATTTTCTTCAATCAGATCTTTGATGCCCTATGCAAGCTTTCTGCAGACTCAGATGCCAACGTACAAAGTGCTGCTCACCTCTTAGACAGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCACTGTTGAGGGAGCGGATGAATGTTTTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCGGATATTGACATGCTGGGGTTTCTTCCTGATTTCCTTGATGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCACTTTCAGAGTTTCTTCAAGAGATTAAAAATTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATCCTGGTACAGAGGGCTGGTTCTCAAGATGAATTTACTAGGCTAACAGCTATCACATGGATAAATGAATTTGTCAAGCTTGGTGGGGACCAGCTTGTTCCATACTATGCTGATATTCTTGGAGCCATTTTACCTTGTATATCAGATAAAGAAGAGAAAATAAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACAGGCCCTGAAAGCAGATCCAGCTGAAGCATTTGATGTAGGAGCTATCCTCTCCATTGCCAGGAGGGAATTATCTAGTGAATGGGAGGGCACTCGAATTGAAGCTTTGCACTGGTTGTCAACCCTTTTAAACAAATATCGTAATGAGGTTTTACAATATCTGAATGACATATTTGACACCTTGCTCAAGGCACTTTCAGATCCATCTGATCAGGTTGTTCTTCTAGTTCTTGATGTTCATGCATGCATCGCAAAAGATCCTCAGCATTTTCGGCAGCTTGTTGTTTTCCTGATGCACAATTTCCGGGTAGACAATTCCCTTTTGGAGAAACGGGGTGCTTTGATAATTCGCCGGCTTTGTGTGCTTTTGAACGCCGAGAGAGTCTACCGGGAACTTTCAACTATACTAGAAGGGGAGTCTGACTTGGATTTTGCTTCAATTATGGTCCAGGCATTAAATTTGATATTACTTACATCATCAGAACTATCTGAGATTAGATACCTTTTGAAGCAAACGCTGGTCAATCCTGCTGGGAAGGATTTATATGTTTCTTTATATGCCTCCTGGTGTCATTCTCCAATGGCAATTATAAGTCTCTGCTTATTAGCTCAGACTTACCAACATGCCAGTGCTGTGATCCAATCTCTGGTTGAAGAGGATGTTAACGTCAAATTCCTAGTCCAGCTTGATAAATTGATTCGCTTGCTGGAAACTCCAATATTTGCTTATCTAAGATTGCAGCTTCTCGAACCTGGACGATATCCATGGCTGTTTAAAGCGTTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTCAAGATTCTCAAAACTCGCTTAAAAGCCGTGCCCTCGTATTCCTTCAATGGTGAGCAATTGAAGAAAACATCCTCAGGGAATACATATCAATTTCTCCATCAAATGTCTGGTGGATCTCAAATCAGTGAGGATGGTGACATAGTCATGGATCGTGGGAACTCGGTCAATGGGATAAATTTTGTTGCAAGGCTACAACAGTTTCAGCAAATGCAGCACCAGCATCGTGTGCATTTGAAAACACAGGCACAGACGCGTAAAAATTCCTCTTCCTCGTCAAAGGAGGCAGAGAGGCAGGAAGAACCAAAGCGACTTCAATCGAGTGAGGTTAATGTTGTTGCTCCTTCAAGATCATCTAAAAGAGCCCAGGGTAGCTAG 2169 0.4255 MADALSLIPAAVLRNLADKLYEKRKNAALDIEGIVKQLASAGDHDKITAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLSSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSQDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELQALKADPAEAFDVGAILSIARRELSSEWEGTRIEALHWLSTLLNKYRNEVLQYLNDIFDTLLKALSDPSDQVVLLVLDVHACIAKDPQHFRQLVVFLMHNFRVDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRYLLKQTLVNPAGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASAVIQSLVEEDVNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYPWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNTYQFLHQMSGGSQISEDGDIVMDRGNSVNGINFVARLQQFQQMQHQHRVHLKTQAQTRKNSSSSSKEAERQEEPKRLQSSEVNVVAPSRSSKRAQGS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00746 722 SUPERFAMILY ARM repeat 3 563 IPR016024 -
Spst3g00746 722 Gene3D - 249 409 IPR011989 -
Spst3g00746 722 MobiDBLite consensus disorder prediction 670 687 - -
Spst3g00746 722 FunFam protein VAC14 homolog 126 248 - -
Spst3g00746 722 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Spst3g00746 722 FunFam protein VAC14 homolog isoform X1 249 410 - -
Spst3g00746 722 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Spst3g00746 722 MobiDBLite consensus disorder prediction 706 722 - -
Spst3g00746 722 FunFam ARM repeat superfamily protein 7 125 - -
Spst3g00746 722 Gene3D - 1 248 IPR011989 -
Spst3g00746 722 MobiDBLite consensus disorder prediction 688 702 - -
Spst3g00746 722 MobiDBLite consensus disorder prediction 670 722 - -
Spst3g00746 722 PANTHER TAX1 BINDING PROTEIN-RELATED 7 691 IPR026825 GO:0006661|GO:0070772
Spst3g00746 722 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00746 Spst-Chr3 11033706 11041772 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00746 3 11033706 11041772 Spst3g00746 3 11033706 11041772 ECH