Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00745 ATGTCGTGGGAAGACGAGATTGTGATGCGCGATGTTACGAATGCGGGGCTTGTTGTCAGCGATCGCATTGGTCGTGAAGTTTCGTCTCAGCTCGACCTCGAAGAAGCTCTAGAAGCTTCCAGATATGCTAGTCACCCTTATTCCACTCACCCCCGAGAGTGGCCCCCTTTAGTTGAGGTAGTGAATACCTGGGAGTTGCCTCCTGTGCTCATCGAAAGATACAATGCAGCTGGTGGGGAAGGAACTGCTTTTTGTGGAATATTTCCAGAAATACGGAGGGCATGGGCATCTGTGGACAATTCATTGTTTCTTTGGCGTTTTGATAAATGGGATGGCCAATGTCCTGAATTTAGTGGGGAGGAGCAAGCTATTTGTGCAGTTGGTCTTGCAAAATCAAAACCTGGTGTTTTTGTTGAAGCTATCCAATATCTTTTAGTTTTGGGGACACCTGTTGAGTTAATTTTAGTAGGAGTTTGTTGCTCTGGAGGAGCAGATGGTTCAGATCCATTCGCAGAAGTTACATTGCAGCCATTGCCAGAGCATACAATACCATCTGATGGGGTTACAATGACTTGTGTAGCATGTACTGACAAGGGTCGCATTTTTGTTGCTGGTCGGGATGGCCATATATACGAAGTTATTTATTCAACTGGTTCTGGATGGCAAAAACGATGCAGAAAAATATGCATCACTGCTGGTTTAGGAAGTGTAATTTCTAGATGGGTTATACCAAATGTATTCAATTTTGGAGCTGTTGATGCTATCGTTGAAATGGTTTTTGACAATGAGAGACAAATATTGTATGCACGGACTGAAGAGATGAAACTTCAAGTTTATGTTCTTGGATCAAATGGTGATGGGCCGTTAAAGAAAGTGGCTGAAGAAAAGAATATTGTCAATCAGAGGGATGCACAGTATGGAGCTAGACAATCAACAGGATCAAGGGCCTCAAGTAGATCACCAAAGCCATCTATTGTTTGCATCTCACCTTTATCTACACTTGAATCAAAGTGGCTACATCTTGTTGCTGTTTTATCAGATGGTAGAAGGATGTACCTATCTACCTCTCCTTCTAGTGGAAGCTTGACTGGATTTAACACCAACCATCTCAAGCCTAGCTGTTTAAAGGTTGTCACTACAAGGCCTGCTCCTCCTTGGGGTGTTAGTGGAGGTCTAACCTTTGGAGCGATGGCTCTTGCTGGTAGACCCCAGAATGAGGATCTCTCCTTGAAAGTTGAGGCCTCTTATTATTCTGCTGGAACTCTTATTCTCTCTGATGCATCACCTTCGGCCATGCCTTCACTTCTTGTTTTGAACAGGGATTCAAGCACACAGTCACTGCCGTCAGGTAATTTAGGAACAAGTATCAGGAGTTCTCGAGCGCTACGGGAATCTGTATCTTCTTTACCAGTTGAAGGACGAATGCTTTCAGTGGCAGATGTTTTACCTTTGCCAGATACTGCAGCTACTGTGCAGTCTTTATATTCTGAAATTGAGTTTGGGGGTTATGAGAACTCTATGGAATCATGTGAAAAGATGTCTGGCAAGCTCTGGGCTAGGGGAGATCTCCAAACCCAACATATACTGCCAAGAAGAAGGATTGTTGTCTTTAGCACCATGGGCATGATGGAAATTGTTTTTAACAGGCCACTGGACATTCTAAGGCGGCTATTGGAATCCAACACTCCAAGGTCAGTTTTAGAAGATTTCTTCAATCGTTTTGGTGCAGGTGAGGCAGCTGCAATGTGTTTAATGCTAGCTGCAAGAATAGTGCATTCTGAAAACCTTATCAGTAATGTTATTGCTGAGAAGGCAGCTGAAGCTTTTGAGGATCCAAGGGTTGTTGGCATGCCACAACTTGAAGGTAGTAATGCATTATCAAACACAAGAAGTGCTGCTGGTGGATTTAGCATGGGCCAGGTTGTTCAGGAAGCTGAGCCTGTTTTTTCAGGTGCACATGAAGGACTCTGTTTGTGTTCATCTAGATTACTTTTTCCCCTGTGGGAACTTCCTGTAATGGTTGTAAAAGGCAATTTAGGTCCTTCAGGCACTCTATCTGAAAACGGGGTAGTTGTGTGCAGACTCTCTGTCGGGGCTATGCAAGTCCTTGAACAGAAACTCCGAGCTTTGGAGAAATTCTTAAGATCTAGAAGGAACCAGAGGAGGGGACTCTATGGCTGTGTAGCAGGATTAGGAGATTTGAGTGGTTCTATTCTGTATGGTAATGGTTCAGCATTAGGTGCCGGTGATCGCAATATGGTCAGAAACTTATTTGGTGCATATTCTAGAAATATGGAGTCCAATGGTAGCAGAACAACTAATAAAAGGCAAAGGTTGCCTTATAGTCCTGCCGAATTGGCTGCCATGGAGGTGAGAGCAATGGAGTGCATTAGGCAGTTGCTCCTTAGATCTGGCGAAGCCCTATTTTTGCTTCAACTTCTTTCACAGCATCATGTGACTCGATTAATTCAGGGATTTGACTCTAACCTTCAACAAGCATTAGTTCAGTTGACATTTCATCAACTAGTTTGTTCTGAGGAGGGTGACCATCTTGCTACAAGACTTATATCTGCTCTCATGGAGTATTATACTGGTCCTGATGGCAGGGGGACTGTAGATGACATTAGTAGGAGATTGAGAGATGGATGTCCAAGTTACTATAAGGAGTCTGATTACAAATTTTTCTTAGCTGTGGAAGCTCTGGAGAGAGCTGCTACGACTATAGATGCAGAGGACAAGGAGCATCTTGCAAGGGAAGCATTTAATTCCTTAAGTAAAGTTCCCGAGTCTGTAGATTTACGAACTGTTTGCAAACGATTTGAGGATTTAAGATTTTATGAAGCTGTAGTGCGCTTACCTCTTCAAAAGGCACAGGCTCTGGACCCTGCAGGTGATGCTTATAATGATGAAATTGATGCAACTGTCAGAGAACAAGCACTTGCTCAGCGAGAGCAGTGTTATGAGATAATTATCAGTGCTTTGCGGTCTCTGAAAGGTGATACCTTGCAAAAGGAATTTGGCTCTCCCATTAGACCAAGTGTTTCACAATCTGCTCTTGATCCATCCTCCAGGAAGAAATATATATGTCAAATTGTTCAGCTGGGTGTCCAATCACCTGACAGAATTTTTCATGAGTATCTGTACCAGGCTATGATTGATCTAGGTCTTGAGAATGAATTGCTAGAGTATGGGGGTCCTGACCTGTTGCCATTTTTGCAAAGTGCTGGTCGTAAACCTATACACGAGGTTCGTGCTGTAACTGCCACAACTTCTCCAATGGGGCAATCGGGAGCACCAATGTCATCTAATCAAGTCAAGTACTATGAACTTTTGGCACGATATTATGTCTTGAAACGCCAGCACATGCTTGCAGCTCATGCACTACTTAGATTAGCTGAAAGGCGTTCTGTTGATGGAGTTCCTACTCTTGAACAGAGGTGTCAATACCTAAGTAATGCAGTCCTACAGGCCAAAAATGCAACTAATAGTGATGGGATAGTAAGTTCTGGTCGAAGTTCCATTGACAGTGGGTTCCTAGATTTGCTGGAAGGGAAGCTTGCAGTTCTTAGGTTCCAGATAAAAATCAAAGAGGAACTAGAGTCTATGGCTTCCAGGTCGGATGTTTTACCTAGCACGTCAGATTCCACCGAAAATAGTGTAATCCCTGAGGGCAGTTCTACTGCTGATGCCAATTTTGTACATGCAACAAGAGAGAAGGCAAAAGAGCTAGCTTCAGATGTGAAGAGTATTACCCAGTTGTATAATGAATATGCTGTTCCCTTTGGACTCTGGGAGATATGCCTGGAGATGCTATACTTTGCCAATTATTCTGGTGATACGGACAGCAGCATTGTCAGAGAGACATGGGCTAGACTTATAGATCAAGCTATATCAAGAGGGGGCATTGCTGAAGCTTGCTCTGTACTAAAGAGGGTCGGGCCCCGCATTTATCCTGGTGAAGGAGCTGTTTTACCACTTGACATTATTTGTCTTCACCTAGAGAAAGCTGGACTGGAGAGGTTGAATTCAGGGGTTGAAGCCGTTGGAGATGAAGATGTTGCAAGAGCCCTTGTTTCTGCTTGTAAGGGTGCAGCTGAACCTGTATTGAACGCATATGACCAATTGTTATCGAATGGTGCTATTTTGCCATCCCCAAGTGTTAGATTACGTATGTTGAGATCGGTTCTGGTGGTACTTCGAGAGTGGGCAATGTCTGTATATTCACAAAGGATGGGTAGCAGTGGCGCTGGGCATTCCTCCCTAATACTAGGTGGAGGATTCTCATCGGAGCGTGCTGTTGCCAGCCAAGGAATTCGGGACAAGATCACGAGTGCCGCAAACAGGTATATGACTGAAGTGCGGAGATTAGCCCTTCCACAGAACCAAACAGAACATGTCTACCGAGGTTTCAGAGAACTTGAAGAATCGTTTATAAGCCAACATTCATTTGATCGATTTTGA 4461 0.4387 MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEVVNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEFSGEEQAICAVGLAKSKPGVFVEAIQYLLVLGTPVELILVGVCCSGGADGSDPFAEVTLQPLPEHTIPSDGVTMTCVACTDKGRIFVAGRDGHIYEVIYSTGSGWQKRCRKICITAGLGSVISRWVIPNVFNFGAVDAIVEMVFDNERQILYARTEEMKLQVYVLGSNGDGPLKKVAEEKNIVNQRDAQYGARQSTGSRASSRSPKPSIVCISPLSTLESKWLHLVAVLSDGRRMYLSTSPSSGSLTGFNTNHLKPSCLKVVTTRPAPPWGVSGGLTFGAMALAGRPQNEDLSLKVEASYYSAGTLILSDASPSAMPSLLVLNRDSSTQSLPSGNLGTSIRSSRALRESVSSLPVEGRMLSVADVLPLPDTAATVQSLYSEIEFGGYENSMESCEKMSGKLWARGDLQTQHILPRRRIVVFSTMGMMEIVFNRPLDILRRLLESNTPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENLISNVIAEKAAEAFEDPRVVGMPQLEGSNALSNTRSAAGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVVKGNLGPSGTLSENGVVVCRLSVGAMQVLEQKLRALEKFLRSRRNQRRGLYGCVAGLGDLSGSILYGNGSALGAGDRNMVRNLFGAYSRNMESNGSRTTNKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDSNLQQALVQLTFHQLVCSEEGDHLATRLISALMEYYTGPDGRGTVDDISRRLRDGCPSYYKESDYKFFLAVEALERAATTIDAEDKEHLAREAFNSLSKVPESVDLRTVCKRFEDLRFYEAVVRLPLQKAQALDPAGDAYNDEIDATVREQALAQREQCYEIIISALRSLKGDTLQKEFGSPIRPSVSQSALDPSSRKKYICQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGRKPIHEVRAVTATTSPMGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAERRSVDGVPTLEQRCQYLSNAVLQAKNATNSDGIVSSGRSSIDSGFLDLLEGKLAVLRFQIKIKEELESMASRSDVLPSTSDSTENSVIPEGSSTADANFVHATREKAKELASDVKSITQLYNEYAVPFGLWEICLEMLYFANYSGDTDSSIVRETWARLIDQAISRGGIAEACSVLKRVGPRIYPGEGAVLPLDIICLHLEKAGLERLNSGVEAVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAILPSPSVRLRMLRSVLVVLREWAMSVYSQRMGSSGAGHSSLILGGGFSSERAVASQGIRDKITSAANRYMTEVRRLALPQNQTEHVYRGFRELEESFISQHSFDRF 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00745 1486 Gene3D - 1180 1419 IPR042538 -
Spst3g00745 1486 FunFam Nuclear pore complex protein NUP155 1180 1416 - -
Spst3g00745 1486 Coils Coil 700 720 - -
Spst3g00745 1486 Gene3D - 894 1054 IPR042533 -
Spst3g00745 1486 Gene3D Nucleoporin, helical domain, central subdomain 1057 1154 IPR042537 -
Spst3g00745 1486 ProSiteProfiles IQ motif profile. 901 930 IPR000048 GO:0005515
Spst3g00745 1486 MobiDBLite consensus disorder prediction 303 323 - -
Spst3g00745 1486 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 12 1478 IPR004870 GO:0005643|GO:0006913|GO:0017056
Spst3g00745 1486 Pfam Nup133 N terminal like 54 543 IPR014908 -
Spst3g00745 1486 Gene3D - 531 883 - -
Spst3g00745 1486 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 874 1292 IPR007187 -
Spst3g00745 1486 FunFam Nuclear pore complex protein NUP155 894 1054 - -
Spst3g00745 1486 FunFam Nuclear pore complex protein NUP155 1057 1154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00745 Spst-Chr3 11021691 11031481 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00745 3 11021691 11031481 Spst3g00745 3 11021691 11031481 ECH