Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00742 ATGGCGGAGGTTTCCGGCGAGGTTGGAGCGGAGGCGACGGTCGCCACGCCGGTCGCGCCGTTGGCGGTGTCCGGATCGTTCAAGGAGGGGAAGAGCTCTTCGAGGAGGCGCGCGCCTTCCATGAGGCAGAGCCTCGACGCGGACGAGTTCATGAACCTGTTGCACGGTTCGGATCCGGTGAAGGTGGAGCTCAATCGGTTGGAGAATGAAGTTAGAGATAAGGACAGAGAATTATCGGAAGCGCAAGCTGAGATCAAAGCCTTGAGGCTCTCTGAACGGCTCAGAGAAAAGGCAGTTGAAGAGCTTACTGAAGAATTGTCGAAGGTTGAGGGGAAGCTGAAGTTAACAGAATCTCTTCTAGAAAGCAAAAATCTTGAAATAAAGAAAATCAATGATGAAAAGAAAGCATCAATGGCAGCTCAGTTTGCTGCTGAAGCCACTCTTCGGAGGGTCCATGCTGCACAGAAGGATGACGACATGCCTCCTATAGAGGCTATTCTTGCTCCTCTAGAAGCTGAACTTAAGCTTGCACGGCAAGAGATTGCTAAACTTCAAGATGATAACAAAGCTTTAGATCGTCTTACCAAATCTAAAGAAGCAGCACTTCTTGAAGCTGAGAAGACTGTGCAGATTGCCTTGGCTAAGGCCTCCATGGTGGATGACCTCCAAAATAAAAATCAAGAGCTAATTAAACAGATTGAGATCTGCCAGGAAGAAAATAAAATTTTGGACAAAATGCATAGACTGAAGGTGGCGGAGGTTGAAAAGCTTACCCAAACCGTGAGAGAACTGGAAGAGGCTGTTCTTGCAGGTGGCGCAGCTGCCAATGCTGTGAGAGATTATCAGCGTAAAGTTCAAGAAATGAATGAAGAAAGAAAAACACTTGACCGGGAGTTAGCTCGTGCCAAGGTAACAGCAAACAGAGTAGCTGTAGTCGTTGCAAATGAATGGAAGGATGCTAATGACAAAGTGATGCCTGTAAAACAATGGCTTGAAGAACGACGATTCTTGCAGGGCGAGATGCAGCAACTTCGGGACAAGCTTGTTATAACTGAGCGCACTGCAAAGTCAGAAGCACAGTTAAAAGAAAAATATCAATTAAGGCTTAAAGTGCTACAGGAGAGTTTGAGAGAAACTTCTAACAGTATTAATCGCGGCACCTCAGAGGGAAGATGTATTAGCAATGGGCCTTCTCGACGTCAATCCCTAGGTGGAGCTGATAACATCTCTAAGCTAACATCTAATGGGTTTCTGAAGAGATCACCATCCACTCAAATTAGGTCTTCTGTATCTTCAAGCACGGTTTTAAAGCATGCTAAAGGCACATCTAAATCATTTGATGGTGGCACAAGGTCATTAGAAAGGAGTAAAATTCTTCTAAATGGAAAACCTCCAAGTTACTCATTCAACCAATCTTCTGAAGGAACCAAAGACAGAGAAGAAAATGATAACTGGAAAGGAAATTCAGATGATAAGCCCAATGACTTCCCAACAGTGGATACGGAGGATAGTGTTTCTGGGGTTTTGTATGATTTGCTGCAGAAAGAGGTCTTAGCCTTGAGGAAAGCTGGTCATGAGAAAGATCAAAGCCTGAAAGATAAAGATGATGCCATTGAAATGCTAGCAAAGAAAGTAGATACATTGACCAAAGCCATGGAAGTTGAGGCTAAGAAGATGAGAAGAGAAGTAGCGGTCATGGAGAAGGAGGTAGCTGCTATGCGTGTGGAGAAAGAACAAGAGAGCAGAGCAAAGCGTTTCAGCAATGTAAAGGGCCCTGTGAACAGTGCTCAGCATCAGCTTGTTTCTGGAAGAAATTTGGCACGGGGAGGATTGACACGCAGCACCCAATGA 1851 0.4527 MAEVSGEVGAEATVATPVAPLAVSGSFKEGKSSSRRRAPSMRQSLDADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRLSERLREKAVEELTEELSKVEGKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALLEAEKTVQIALAKASMVDDLQNKNQELIKQIEICQEENKILDKMHRLKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLVITERTAKSEAQLKEKYQLRLKVLQESLRETSNSINRGTSEGRCISNGPSRRQSLGGADNISKLTSNGFLKRSPSTQIRSSVSSSTVLKHAKGTSKSFDGGTRSLERSKILLNGKPPSYSFNQSSEGTKDREENDNWKGNSDDKPNDFPTVDTEDSVSGVLYDLLQKEVLALRKAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAVMEKEVAAMRVEKEQESRAKRFSNVKGPVNSAQHQLVSGRNLARGGLTRSTQ 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00742 616 Coils Coil 219 267 - -
Spst3g00742 616 Coils Coil 64 91 - -
Spst3g00742 616 Coils Coil 99 133 - -
Spst3g00742 616 Coils Coil 278 305 - -
Spst3g00742 616 Coils Coil 362 382 - -
Spst3g00742 616 MobiDBLite consensus disorder prediction 380 502 - -
Spst3g00742 616 Coils Coil 549 576 - -
Spst3g00742 616 MobiDBLite consensus disorder prediction 474 498 - -
Spst3g00742 616 Coils Coil 167 194 - -
Spst3g00742 616 Coils Coil 327 354 - -
Spst3g00742 616 Pfam Microtubule-associated protein 70 48 597 IPR009768 GO:0007010|GO:0008017
Spst3g00742 616 MobiDBLite consensus disorder prediction 1 45 - -
Spst3g00742 616 MobiDBLite consensus disorder prediction 579 616 - -
Spst3g00742 616 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 43 595 IPR009768 GO:0007010|GO:0008017
Spst3g00742 616 MobiDBLite consensus disorder prediction 380 449 - -
Spst3g00742 616 MobiDBLite consensus disorder prediction 588 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00742 Spst-Chr3 11000650 11004724 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00742 3 11000650 11004724 Spst3g00742 3 11000650 11004724 ECH