Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00731 ATGGACGAAGGCATTGTTGAGAGGGCGCTGAATAGTTTAGGAAAAGGCTTCGACTTGACCTCAGATTGCAGGCTCAAATTCTGCAAAGGCGAAGAGCGTTTGGTTCTTCTCAACGAAACCGAGAAACGAAAACTCACGGTGCCAGGTTTCGGACCCATCGGCGATGTCTCCGTTGACATCAAATGCGACAAGGGCGAATGCACCCGCTACCAATCCGACATCCTCACCTTCACCCAAATGTCAGAGCTCTTCAACCAGAAGAGTTCGATCCCTGGGAGAATCCCATCTGGGTACTTCAACACCGTGTTTGGGTTTGATGAATGTTCGTGGGCAACTGATGCTGCAAACACCAAGTGTTTGGGTATTGATGGCTATTTTATGAAACTCTTCAATGTTCGTATTGATCGGTACCCACTCGTTCTGTCTCATCAAGTCCTTGAAGCTGTTCCTTCTTCCTGGGATCCCTCTGCACTTGCAAGATTCATTGAGAACTTCGGGACACACATCCTTGTGGGGCTTAGCATTGGTGGCAAAGATTTAGTGTTGGTCAAGCAAGACGTGTCTTCCAGCTTGGAGCCATCAGAGCTGAAGAAGCACTTGGATGAGCTTGGAAATCAATTATTCACTGGAACATGCAGTTTCCTTCCAAAATCCAAAGACCAAAAATACAAGGTACCACAGGCTTTTGATGTCTTTGGTCCACAAATTGTCGCCTTCAATAGCTCTACATCCGTTTGTGCAAAAGATGGAATTACTGTGATATGTGCGAAGAGGGGAGGGGATACCCTAGTGAGTGACCATAGTGAATGGCTTCACACAGTTCCGAAGAAGCCGGATGCTGTTGATTTTTGCTTCATTCCCATCACTTCTCTTCTTAAAGATGCTCCTGGCAAAGGCTTCCTATCCCATGCCATCAACCTCTACCTACGATATAAGCCTCCGATGTCAGATTTGCCATACTTTCTTGACTATCAATCACACAGGCTTTGGGCTCCCATTCACAATGATCTTCCACTCTGTCCTGTTACAAACCGAACCACCTCTTCACCATCTCTCAGTTTCAACTTGATGGGTCCCAAGCTTTATGTAAACACGTCAAAGGTAACAGTTGGTAAAAGGCCAATCACAGGGATGCGCTTGTTTCTTGAGGGCATGAAATGCAACAGATTAGCCATACACGTGCAACATCTATTGAACACTCCAATAATGCTCATCGGCAAAATAGAGAACGCCTCAATATGGTCAGAAGAAATCACTGATGACCGTTTCTTCGAAGCAATCAATGGGAAGAAATTTTCCCACGTATGTACAGCACCAGTGAAATACGACCCTAGATGGAGCTCTGATAAGGATGTGGCCTTTATAGTCACAGGAGCCCAACTTCATGTGAAGAAACATGACTCAAGGAGTGTCCTTCATCTAAGGCTGTTGTTCTCTCAGGTGTCTAATTGTGTAGTTGTAAAATCAAGTTGGACACAGGGCTCCTCCGGGTTATCACAGAGGTCTGGCATTTTCTCAGTGATAAGCACATCAATTTCTGGTAAAGACCAGAAAAAACCAGTTGTAGTTTTGGACTCCAGTGTGTTTCCAACAGGACCTCCAGTGCCTATGCAAAAACAAAAGCTGTTGAAATTTGTAGACGCCTCACAGCTGTGTAAAGGTCCACAAGATAGTCCTGGCCATTGGTTGGTCACTGGGGCAAGGTTGGTCTTGGACAAGGGTAAGATATGCTTATGGGCTAAGTTCTCTTTGTTAAATACTGGTTCATGA 1770 0.4537 MDEGIVERALNSLGKGFDLTSDCRLKFCKGEERLVLLNETEKRKLTVPGFGPIGDVSVDIKCDKGECTRYQSDILTFTQMSELFNQKSSIPGRIPSGYFNTVFGFDECSWATDAANTKCLGIDGYFMKLFNVRIDRYPLVLSHQVLEAVPSSWDPSALARFIENFGTHILVGLSIGGKDLVLVKQDVSSSLEPSELKKHLDELGNQLFTGTCSFLPKSKDQKYKVPQAFDVFGPQIVAFNSSTSVCAKDGITVICAKRGGDTLVSDHSEWLHTVPKKPDAVDFCFIPITSLLKDAPGKGFLSHAINLYLRYKPPMSDLPYFLDYQSHRLWAPIHNDLPLCPVTNRTTSSPSLSFNLMGPKLYVNTSKVTVGKRPITGMRLFLEGMKCNRLAIHVQHLLNTPIMLIGKIENASIWSEEITDDRFFEAINGKKFSHVCTAPVKYDPRWSSDKDVAFIVTGAQLHVKKHDSRSVLHLRLLFSQVSNCVVVKSSWTQGSSGLSQRSGIFSVISTSISGKDQKKPVVVLDSSVFPTGPPVPMQKQKLLKFVDASQLCKGPQDSPGHWLVTGARLVLDKGKICLWAKFSLLNTGS 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00731 589 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 322 IPR020864 -
Spst3g00731 589 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 4 586 IPR044663 GO:0006952|GO:0012501|GO:2000031
Spst3g00731 589 SMART MACPF_8 117 310 IPR020864 -
Spst3g00731 589 Pfam MAC/Perforin domain 100 308 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00731 Spst-Chr3 10942414 10948244 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00731 3 10942414 10948244 Spst3g00731 3 10942414 10948244 ECH