Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00727 ATGGCTGTCCCCGAACACAGAATAAGCTTGGAACCTGAGAAAAAAACCCTTCTCAACCTCCACACCGAGAAGCACTTCACCGCCGGCGAAATAGTCCGCGACGTCATCATCGGGGTTTCTGACGGTCTCACCGTCCCATTCGCCCTTGCCGCCGGTCTCTCCGGCGCCAATGCCACTTCCTCCATCGTTCTCACAGCCGGCATAGCGGAAGTCGTCGCCGGCGCCATCTCCATGGGGCTCGGCGGTTATTTGGCAGCGAAGAGTGAAACTGACCATTACGCGAGAGAATTGAAAAGAGAGCAAGAAGAAATCATCGCCGTGCCAGAAACTGAAGCGGCAGAGGTAGCAGAAATACTGGCTCAGTACGGGGTAGAGGCACATGAATATGCACCTGTGGTGAATGCTCTGAGAAAAAACCCTCAAGCATGGGTTGATTTCATGATGAAATTTGAGCTGGGACTAGAGAAGCCAGATCCAAGGAGAGCATTGCATAGTGCAATGACAATTGCCATTGCTTACATAATGGGTGGGGCTGTTCCTCTGGTTCCTTACATGTTCATTCCAAGGGCTGCAGAGGCAGTTGTGTTTTCAGTCGTGGTTACCTTGCTTGCATTGCTGCTTTTTGGTTATGCCAAGGGCCACTTCACGGGCAATAAACCATTCAGGAGTGCTTTGGAAACAGCTCTGATCGGTGCCATAGCCTCTGCAGCTGCTTTTGCTTTGGCCAAGGCTTTCCATCCGTAG 744 0.5188 MAVPEHRISLEPEKKTLLNLHTEKHFTAGEIVRDVIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVVAGAISMGLGGYLAAKSETDHYARELKREQEEIIAVPETEAAEVAEILAQYGVEAHEYAPVVNALRKNPQAWVDFMMKFELGLEKPDPRRALHSAMTIAIAYIMGGAVPLVPYMFIPRAAEAVVFSVVVTLLALLLFGYAKGHFTGNKPFRSALETALIGAIASAAAFALAKAFHP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00727 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 14 245 IPR008217 GO:0005384|GO:0030026
Spst3g00727 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Spst3g00727 247 CDD CCC1 11 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00727 Spst-Chr3 10904580 10906887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00727 1 243 Nodulin-like Gene Family AT3G43660 23.770 5.60e-09 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00727 3 10904580 10906887 Spst3g00727 3 10904580 10906887 ECH