Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00719 ATGGTTCGGGGTGAACTGCCGTTTCCCAAGTGTAAAATAGCGTTGGATTCTGTCATATTTCCAGATAAAGCTTCCAATGAGAAAATAGCTTCCAATTTTGCTGATATATTGTCCCAAATGGCTCAAGATGTAACTGGTGAGGAGTGTAGAGTGCTTGGCTTTTGGCTTTTTGAAATGGTGTTGAAGGAGGCTAGGAAAACATTGGAAGGATTATTGAATGGGGGATCTCATGGTGATTCCCGTTCTCGGCTCATTAAACTGGCAAGATGGCTTGTGGAATCTGAAATGGTTCCAGTTAGGCTACTTCAAGAACGTTGTGAGGAGGAATTCTTGGGGGAGGCTGAATTGATCAAAATTAAGGCTCAGGAGTTGAAGGGTAAAGAGGTCAGAGTTAATACGCGACTTCTCTATCAGCAAACCAAATTCAATCTTCTCAGAGAAGAGAGTGAGGGCTATGCAAAGCTGGTGACTCTTCTTTGCCGAGATTCTGAAGCACCTACGCAAAAATCATCTGCAGCAACCATTGGCATTATTAAGTCATTAATTGGTCATTTTGATTTGGATCCAAATCGCGTTTTTGATATTGTCCTAGAGTGTTTTGAACTGCAGCCTGATGATGATGTGTTTATAGAGTTGATTCCTATATTTCCAAAGTCTCATGCATCGCAGATTCTTGGATTTAAATTTCAATATTATCAACGCATGGAAGTCAGCAGTTCTGTTCCGTTTGGGCTCTATAGACTTACAGCCTTGCTGGTGAAGCAAAATTTTATTGATCTTGATAGCATATACGCTCATCTACTTCCCAGAGATGATGAGGCATTTGAGCATTACAATACTTTCTCTTCCAAGCGCCTTGATGAGGCTAATAAAATTGGAAGAATAAACCTTGCTGCAACTGGAAAAGATCTAATGGACGATGAGAAACAGGGGGATGTCACTATAGATCTCTTTGCTGCCTTAGACCTTGAAACAGAAGCAATTGAAGAACGAACAACAGAGCTTCAAACAAGTCAGACTTTGGGCTTGCTTACTGGCTTTCTCGCCGTGGATGACTGGTATCATGCACATCTACTGTTTGAACGCCTTTCACCTCTCAATGCTGTGGAACATATTCAAATATGTGATAGTTTGTTTAGGCTTATTGAGAAGTCAATTTGTTCAGCATACGATGTTGTTCGTCAGACACATCTTCAAAATCCTGGATCGACAGGAGGCCCTGATGTTATGGATATAGATAACTCTTCAGGATATAGTTCTTTCATAGATCTACCAAAGGAACTTTTTCAGATGCTAGCTTGTACTGGACCTTATCTCTACCGTGATACTGTACTGTTGCAGAAGGTTTGTAGGGTGTTGAGAGGTTATTACCTTTCTGCTCTTGAGCTTGTAAGTCGCAGCAATGGTGTCTTTAATCCTCAATTACATGTTCCTGGAAACCCTAACCTACATCTTAAGGAGGCAAGGCTAAAGGTGGAGGATGCTTTAGGAGCATGTGTATTACCTTCCCTGCAGTTAATTCCTGCCAATCCAGCTGTTGGCCAGGAAATATGGGAACTAATGAGTCTTCTTCCTTATGAGGTGCGATATCGATTGTATGGTGAATGGGAGAAAGATGATGAGCGCATTCCTATGCTCTTAGCTGCAAGACAGACTGCCAAGTTGGACACTAGACGTATTTTGAAACGGCTGGCAAAGGAAAATTTGAAGCAATTGGGTCGGATGGTTGCAAAATTAGCCCATGCCAACCCTATGACTGTCCTCCGCACAATTGTTCATCAGATTGAGGCTTACAGAGACATGATTACTCCTGTAGTGGATGCATTTAAGTACTTAACCCAGCTCGAGTATGATATATTGGAATATGTTGTGATTGAGCGATTGGCACTTGGTGGACGTGATAAGTTAAAGGATGATGGCCTTAATTTGTCAGACTGGCTTCAATCTCTAGCTTCATTTTGGGGCCATCTATATATGCGGGATGCCTTGTATCAAATTCCAGGATGCAGATCAACCTTAGCAAATGCTGGATTACTGGGCATAGCAGCATTTTATGTCCCTGAGTGGATGATCAGTTTAGTGGTATTTATGGGGTATTATGCGAAGGAGGGGGCTGGTTTGGATCCTTCTGATGAGACTTCGATTGTAGTAGCATTCTTGTGTAAGAAGTACCCATCAATGGAATTACGGGGCCTTTTCCAGTATCTTGTGAATCAGTTAAAAAAAGGGCAAGGAATTGAGCTTGTTCTACTGCAGGAGCTTATTCAACAAATGGCAAATGTCCAGTACACTGAGAACTTGACTGAGGAACAGCTTGATGCAATGGCAGGTAGTGATACTCTCAGATATCAAGCAACTTCTTTTGGGGTAACTCGGAATAACAAGGCATTGATAAAGTCAACTAGCAGACTTAGAGATGCATTACTTCCAAAAGATGAACCAAAGTTGGCAGTCCCGCTGTTACTGCTTCTTGCTCAACATCGTTCTCTGGTTGTCATCAAGGCAGATGCACCCTACATTAAGATGGTTAGTGAGCAGTTCGATAGATGTCATGGAACTCTCCTTCAGTATGTGGAATTTCTTGGCAGTGCAGTCACACCAGCATCAAATTATGGCATTCTTATTCCCTCCCTCAATGACCTGGTCCACCTTTACCACCTTGACCCTGAGGTTGCTTTCTTGATATATCGTCCTGTGATGAGGCTTTTCAAGTCTCAGAAAAATCCTGACGTTTATTGGCCCTTGGATGATAAAAATTCTGCTAGTGATGCATCTTCGAACATTGAATCAATTCGCTTGGATAATTCTGGTAGTATGGTTCTAAATCTTGGCTCTGCTCAAAATCCTATAAGTTGGTCGTATCTTCTTGATACTGTTAAAACCATGTTGCCTCCAAAAGCATGGAATAGCTTATCTCCTGATCTTTATGCAACATTTTGGGGACTTACATTATATGATCTGTATGTCCCAAAAAATCGATACGAATCGGAAATAGCCAAGCTGCATGCAAATCTTAAATCTTTGGAGGAGCTTTCTGACAATTCCAGCTCAGCAATTACAAAGAGGAAGAAAGAAAAGGAAAGAATTCAGGAATCTCTTGACCGTCTGATTAGTGAACTGCATAAACATGAGGAGAGTGTTGCATCTGTTCGTAGACGGCTATCTCATGAAAAAGACAGATGGTTAAGTTCCTGTCCTGACACCTTGAAGATCAACATGGAGTTTCTTCAGCGTTGTATTTTTCCACGCTGTACTTTCAGTATGCCAGATGCTGTTTATTGTGCTATGTTTGTCCACACACTGCATTCCCTTGGAACCCCCTTTTTTAACACAGTCAATCACGTAGATGTTTTGATTTGTAAGACCCTTCAACCTATGATTTGCTGCTGCACTGAATATGAGGCAGGCAGGCTTGGCAGGTTTCTGTATGAGACTTTGAAGATTGCTTACTATTGGAAGAGTGATGAATCTATTTATGAACGTGAGTGTGGAAACATGCCAGGCTTTGCCGTCTACTATAGATATCCAAATAGCCAGCGAGTTACATATGGGCAGTTCATTAAGGTACACTGGAAGTGGAGTCAAAGAATCACACGTTTACTAATTCAGTGTCTGGAATCTAGCGAGTACATGGAAATTAGAAATGCTCTTATAATGTTGACAAAAATTTCTAGTGTTTTCCCTGTTACACGGAAGAGTGGGATAAACCTCGAAAAGCGAGTAGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAAGTGTTGGCCACTGGTGTTGCAGCAGCATTAGCTGCTAGGAAGCCTTCTTGGGTTACCGACGAAGAATTTGGTATGGGTTATCTTGAGTTGAAACCTGCACCATCTTTGACTAAATCTTCAGCTGGCAATTCAGCAACTGTACCTAGTGGGATCAATCTCAATGTTTCACAAACTGAATCTGCCAGTGGAAAACATGTGGACTCTGGAAACACAGCCAAAGATCAGTTAATAAGAACAAAACCTGTAGATGGCAAGTCTGAAAGAACTGAAAGCATTACCACGGCAAAATCTGATTCTGGCCATATAAAAGTCAAGAGTGGTTCAATGGTGAATGGATTAGATGCCCAAACATCCTTGGTTGCATCTTCTGTACAATCTGGGATGTCAAAATCTACGGAAAACTCAAAGCAAGTGGAAGAATCCTTAAATAGAGCATCAGATGATCATGGGACTAGAATTTCTGAGTCAAGAAGTTCAGCAAAGCGTTCAGTGCCTACTGGTTCACTTTCAAAGCCCTCAAAACAAGACCCTGTAAAAGAGGATGGTAGGTCTGGAAAACCAGTTGCTAGAACTTCTGGTTCCTCGAGTAGTGACAAAGATCTACAAACCCATGTGTTGGAGGGAAGACACAGCGGAACTACCAATGTAGCTTCTTCAGTTAGTGCTAATGGTAACACCATTTCATGTTCTACTAAAGGTTCAAATCCACCAGTAAGGATTTCATTGGATGGTCCAGGTAATGAGTCAAAGGCAGAGATTGGAGTTTCCAAGTCTTCTGATATTAGGGCATCTGTGGTGAAGGATGATGGAAATGATACCACTGATTTCGTGAGAGGATCTTCTTCTCGTGTAGTGCATTCCCCTAGGCATGAAAACACAGGAGTCGCGTCAAAATCTAATGATAAAGTTCAGAAGAGAGCCAGTTCTGCTGAAGAACCAGACAGATTAGGTAAACGACGGAAAGGGGATGTTGAGCTAAGAGATTTTGAAAGTGAAGTTCGATTCACTGAAAGAGATAAGCTGATGGATCCTCGCTTTGCTGATGACAAATTGGGACCAGAGGAACATGGTCTATCCAGGGCAGGTGATAAGCCACTGGAACGGCCGAAAGAGAAAGGCAGTGAAAGATATGAAAGGGAGCACAGGGAAAGATTAGACCGAATGGACAAATCTCGTGATGACTCTGGGGCAGAAAAACCTAGGGATAGATCAATTGAAAGATATGGAAGAGAACGATCTGTTGAGAGATTGCAAGAGAGAGGTAGTGAGAGGAGTTTTAATAGACTCCCTGAGAAAGCTAAGGATGAAAGAAGCAAGGATGATAGAAATAAATTACGTTACAGTGATGCATCAGTAGAAAAATCTCATGCTGATGATCGCTTCCATGGTCAAAGCTTGCCTCCACCACCCCCTTTACCTCCTAATATGGTTCCTCAATCTGTAGGAGCTGGTAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGGTACGAGGCACTCTCAAAGACTTTCTCCAAGACATGAAGAAAAGGAACGGAGACGATCTGAAGAGACTGTGGTTTCTCAGGATGATGCTAAACGCCGAAAAGAAGATGATTTTCGAGATCGAAAACGGGAAGAAATTAAGGTTGAAGAGAGGGAGAGAGAAAGAGAGAAAGCAAACATTCTAAAGGAAGAATTGGATTTAAATTCCGTGTCCAAGAGACGCAAACTTAAGAGGGAGCATCTACCTGCTGGTGAACCTGGGGAGTACTCACCAGTGGCTCCTCCACCTCCTCCCCCTGGTATTGGTATGTCACTAGGGTATGATGGAAGGGATAGAGGAGACAGAAAGGGACCCATTATCCAGCATCCAAACTACATAGATGAACCAAATCTGAGGATTCACGGTAAAGAGGTGGCCAGCAAGTTGAATCGTCGGGAGTCAGACCCCTTGTATGATCGTGAATGGGATGATGAGAAGAGACAAAGAGCTGATCAAAAGAGAAGGCACCGGAAGTAG 5760 0.4231 MVRGELPFPKCKIALDSVIFPDKASNEKIASNFADILSQMAQDVTGEECRVLGFWLFEMVLKEARKTLEGLLNGGSHGDSRSRLIKLARWLVESEMVPVRLLQERCEEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKSSAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDDDVFIELIPIFPKSHASQILGFKFQYYQRMEVSSSVPFGLYRLTALLVKQNFIDLDSIYAHLLPRDDEAFEHYNTFSSKRLDEANKIGRINLAATGKDLMDDEKQGDVTIDLFAALDLETEAIEERTTELQTSQTLGLLTGFLAVDDWYHAHLLFERLSPLNAVEHIQICDSLFRLIEKSICSAYDVVRQTHLQNPGSTGGPDVMDIDNSSGYSSFIDLPKELFQMLACTGPYLYRDTVLLQKVCRVLRGYYLSALELVSRSNGVFNPQLHVPGNPNLHLKEARLKVEDALGACVLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLYMRDALYQIPGCRSTLANAGLLGIAAFYVPEWMISLVVFMGYYAKEGAGLDPSDETSIVVAFLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSDTLRYQATSFGVTRNNKALIKSTSRLRDALLPKDEPKLAVPLLLLLAQHRSLVVIKADAPYIKMVSEQFDRCHGTLLQYVEFLGSAVTPASNYGILIPSLNDLVHLYHLDPEVAFLIYRPVMRLFKSQKNPDVYWPLDDKNSASDASSNIESIRLDNSGSMVLNLGSAQNPISWSYLLDTVKTMLPPKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEESVASVRRRLSHEKDRWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHVDVLICKTLQPMICCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSLTKSSAGNSATVPSGINLNVSQTESASGKHVDSGNTAKDQLIRTKPVDGKSERTESITTAKSDSGHIKVKSGSMVNGLDAQTSLVASSVQSGMSKSTENSKQVEESLNRASDDHGTRISESRSSAKRSVPTGSLSKPSKQDPVKEDGRSGKPVARTSGSSSSDKDLQTHVLEGRHSGTTNVASSVSANGNTISCSTKGSNPPVRISLDGPGNESKAEIGVSKSSDIRASVVKDDGNDTTDFVRGSSSRVVHSPRHENTGVASKSNDKVQKRASSAEEPDRLGKRRKGDVELRDFESEVRFTERDKLMDPRFADDKLGPEEHGLSRAGDKPLERPKEKGSERYEREHRERLDRMDKSRDDSGAEKPRDRSIERYGRERSVERLQERGSERSFNRLPEKAKDERSKDDRNKLRYSDASVEKSHADDRFHGQSLPPPPPLPPNMVPQSVGAGRRDEDADRRYGGTRHSQRLSPRHEEKERRRSEETVVSQDDAKRRKEDDFRDRKREEIKVEEREREREKANILKEELDLNSVSKRRKLKREHLPAGEPGEYSPVAPPPPPPGIGMSLGYDGRDRGDRKGPIIQHPNYIDEPNLRIHGKEVASKLNRRESDPLYDREWDDEKRQRADQKRRHRK 1919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1528 1556 - -
Spst3g00719 1919 Coils Coil 991 1011 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1310 1328 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1877 1911 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1836 1850 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1737 1832 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1331 1347 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1374 1392 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1374 1919 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1410 1426 - -
Spst3g00719 1919 Coils Coil 1787 1816 - -
Spst3g00719 1919 Pfam Transcription factor/nuclear export subunit protein 2 968 1262 IPR021418 -
Spst3g00719 1919 PANTHER THO2 PROTEIN 720 1807 IPR040007 GO:0000347|GO:0006397|GO:0006406
Spst3g00719 1919 Coils Coil 1019 1053 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1310 1358 - -
Spst3g00719 1919 Pfam THO complex subunit 2 N-terminus 421 574 IPR032302 -
Spst3g00719 1919 Pfam THO complex subunit 2 N-terminus 25 400 IPR032302 -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1393 1409 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1557 1714 - -
Spst3g00719 1919 MobiDBLite consensus disorder prediction 1441 1490 - -
Spst3g00719 1919 Pfam Transcription- and export-related complex subunit 576 651 IPR021726 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00719 3 10820927 10843929 Spst3g00719 3 10820927 10843929 ECH