Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00120 ATGAGGATGGGGATTCCAGAGAAGAGTGGTGTTGAGAATTGCTTTGATTATGGAAGAGATAGGGGTGGTGGTGGTGCGAGTCACGATGACATTGTCGATCTTTTGCCTTCGGATCCCTTCGGCATGGACATCAGCACCACCTTCACTGCCCTCACCGGGTGGCTTGAGGATTTGGAGGATTATAGTGGTTATAGAAGGGATGAGCTTGGGGCGAGTGATAACAATTACCAGCTATTTGCTGGGTTGAATTTCATTTGGAGCAATGCTATGAGGTTCCATGCATGTGTTGAGGAGAAGATGGGGTTTGGCGAGTGTAGTTCTGTGAGTGATGATGGAGCTGCTGCTGCATCGAGCAATTTTGGGGTTGGATCTGCTTCTGATGCTGATGTATTGGGTTTGCCCGCCACTAGCGGGTCGGGTGATGTTGTGAGACGGGGTGGAGGAGGGAGTGGTTATGATGAGCTTGGAGGAGGAGGAGGAGGAGGTATGGGTGACGAGTTTGGTCCTCACCCTGCCTTGAGTTTTTCTCTTGGTTATCTGAGGTTGTCGGATCTTCTTGTTGTTGAAAGAGTGTGTAAATCTTTGCATTCCACGGTTCATGATGATCCGCTTTTGTGGAGGAGTATCCACGTGGATCAGCCTTTGAATGAGAGGATAACTGATGATGTTCTTTTTCGATTGGCTAACAGGGCTCAAGGTAATCTTCAGTCCTTGAGCCTTGTTGAATGTACCAGAATAACTGATGAAGGTTTGAGGCGGGTTCTTGAAAGCAATCCCAAATTGACCAAGTTGAGTGTTCCTGGGTGTACAAGACTCAGTATTGAGGGCATTGTGGGTATGTTAAAAGCCTACAACTCTGGAGGTACCCAAGGGGTGAAGCAGTTACACATAGGTGGTCTCTATGGTGTCACGCAGAAGCATTTTGAAGAGTTGAGGTTCTTGTTGGATGCTGATAGCCAGCAGCAGATGCAGCAATCTCACAAACCACATTTCTATCGCAGGGGAAATTTGTATCTGTCCTTTTATGATGACCGAGCTATGGATATTGAAGTTTGTCCACGATGCCAGAATTTGAGGCTTGTATACGATTGTCCGGCTGAGAGTTGTCAAGGGATGGGACACACCACTCAGATGTGCAGGGCATGCACTCTATGCATACCCCGGTGTAGTCAGTGTGGCCACTGTATCAATGACAGTGAATATGAGGAAACATTCTGCCTGGAGTTGCTTTGCTCTTCTTGTTCTAAGCAGCAAGTCAAATGTTCAGAAGGAAAGACTGGACCAGCTAAGTCAGTTTTTATTCATGAACAAAGCTAG 1317 0.4708 MRMGIPEKSGVENCFDYGRDRGGGGASHDDIVDLLPSDPFGMDISTTFTALTGWLEDLEDYSGYRRDELGASDNNYQLFAGLNFIWSNAMRFHACVEEKMGFGECSSVSDDGAAAASSNFGVGSASDADVLGLPATSGSGDVVRRGGGGSGYDELGGGGGGGMGDEFGPHPALSFSLGYLRLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLQSLSLVECTRITDEGLRRVLESNPKLTKLSVPGCTRLSIEGIVGMLKAYNSGGTQGVKQLHIGGLYGVTQKHFEELRFLLDADSQQQMQQSHKPHFYRRGNLYLSFYDDRAMDIEVCPRCQNLRLVYDCPAESCQGMGHTTQMCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSSCSKQQVKCSEGKTGPAKSVFIHEQS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00120 438 Gene3D Ribonuclease Inhibitor 175 433 IPR032675 -
Spst3g00120 438 Pfam F-box-like 178 210 IPR001810 GO:0005515
Spst3g00120 438 SUPERFAMILY F-box domain 177 211 IPR036047 GO:0005515
Spst3g00120 438 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 77 411 - -
Spst3g00120 438 SMART LRR_CC_2 258 283 IPR006553 -
Spst3g00120 438 SMART LRR_CC_2 232 257 IPR006553 -
Spst3g00120 438 SUPERFAMILY RNI-like 217 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00120 Spst-Chr3 2152939 2155327 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00120 3 2152939 2155327 Spst3g00120 3 2152939 2155327 ECH