Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02316 ATGATGGAAGTAATGTGTATGGTCAAACTCGTGATCAAGATACTCAAACTTGAAAGGGCTGCCACATATGTTGCTGTTTGCTACTTTCAAAAGGCCATTTCAGTGCTGGGTATCAGGATGGATCCCAACTTTCCTGTAGTTGACCTGTTTGATGAAGAGGAGGGCATATCATATCCCTCAGACTCACTTGGTTTTGCAACTATGGACCCTTCGCTGGAAGACAACGACTTCTCAGAAACTGCCAAGTTCATAAACCAGATCCTCATGGAAGAGAACGTTCAACAAAATCCATTCTATGACTCACTCACCTTGCAGGTTACCGAGAAGTCCTTCTACGATGCTCTCATTGGGAACCTACCTCTTTCCCCCAATCAACATGCCCTTGCTCTCAGCCCCGAAGGTGAAACTACCACCAGCAATTACAACAACAGTTCTTCAGATGAAAATTTCCCTTCCCCAGATTTTGTTTCTGTTTCTGCTTCTGCTTTTCAGTTTAACCCCCAGACCCTTTCTCAACCACCTTCATTTACTGTTAGTCATGGATTCTCAGATTTGGATTCTTCTATTGCCAAATTCTTGGCACAGAATATGTTCAATGATGCTGATTCTGTTTCCCAGTTTAGGAGGGGCTTAGAGGAAGCTACCAAGTTTCTTCCTTCTGGCCCTATGCTTGTAACTGGTCTGCAATCAAACGGGGAAGAATCAATCAATACGTTTGGAGATAATTCCTGCGGATGGAAAAGCAGGAAGAATCACGAGCGCGAAGAGAGAAATACCATAGAAGAAGGGAGAAGTAGTAAGCAATCAGCACTTAGCCTTGTTGATGAGAGTGACATTTCAGATGCTATTGATCAGGTGTTTCTAACGGTGGAAAACGTGTGTAGTAAACACAATTCTTTGCAGAGTGGAGCAGTGAAAGATAAGGAGCGAGATGGAGGGAAGGGGCGATCAAAGAAACAAGGGACGAAGAAGGAGACTGTGGATTTGAGGAATCTTCTGCTGATGTGTGCACAATCTGTGTATGCCAATGACAGCAGAGCTGCCACTGAATTACTAAAGCAGATTAGGCAACACTCGTCTCCCTTTGGGGATGCATCACAGAGGGTAGCTCATTATTTCGCCAATGGTCTTGATGCTCGCTTGGTTGGGGCTGGTTCAGGTGCTCATGGAATATTTTCTTTTCTGAGCTCTAAGAGGATTACTGCTGCTGAGTTCCTGAAGGCTTACCAAGTTTTTCTATCTTCCACCCCTTTCAAGAAGTTTACATATTTCTTTGCAAATAAAATGATTATGAAAGCAGCTGCAAAATCAGAAACAATCCATATTATTGATTTTGGCATCCTATATGGTTTCCAGTGGCCAATTCTCATAAACTTTTTATCAAAGAGAGATGGTGGTCCTCCCAAGCTGAGGATCACAGGGATAGAGTTTCCCCAACCTGGCTTTCGTCCCACTGAAAAAAATGAGGAGACCGGTCACCGTCTAGCTAACTATTGTCAGCGTTACAAAGTTCCCTTTGAATATCATGCCATAGCATCAAGGAACTGGGAAACCATTCAGGTGGAAGCCCTTAAAATTGAGAGCAACGAGATAGTTGTTGTCAATTGTCACATGAGGTTTGAACATTTACTGGATGAGAGCACTGTTGAAGTGAACAGTCCTAGAAATGCAGTCCTACATTTGATCAGGAAGATAAATCCGGACATTTTTACGCACATCATTATCAATGGATCATATGATGCCCCTTTCTTTACCACACGGTTTAGGGAGGCACTGTTCCACTATTCTGCTATCTATGATATGTTTGACATTGTCATACCTCGTGAAAACGATTGGAGATTGACGATTGAGGGAGAGATTTTGGGTCGGGAAGCTATGAATGTTATAGCATGTGAAGGTTCTGACAGGGTTCACAGACCTGAGACATACAAACAATGGCAAGTTCGAAATACAAGGGCTGGTTTCAAGCAGCTCCCACTGGATGAGGACTTATTGGCCAAATTCAGGATTAAGTTAAAGGAATATCACAGAGACTTTGTCTTCGATGAAGATAACAACTGGATGCTTCAAGGGTGGAAGGGGCGCATTTTCAATGCTTCTACTTGTTGGGTACCAGCATAA 2121 0.4309 MMEVMCMVKLVIKILKLERAATYVAVCYFQKAISVLGIRMDPNFPVVDLFDEEEGISYPSDSLGFATMDPSLEDNDFSETAKFINQILMEENVQQNPFYDSLTLQVTEKSFYDALIGNLPLSPNQHALALSPEGETTTSNYNNSSSDENFPSPDFVSVSASAFQFNPQTLSQPPSFTVSHGFSDLDSSIAKFLAQNMFNDADSVSQFRRGLEEATKFLPSGPMLVTGLQSNGEESINTFGDNSCGWKSRKNHEREERNTIEEGRSSKQSALSLVDESDISDAIDQVFLTVENVCSKHNSLQSGAVKDKERDGGKGRSKKQGTKKETVDLRNLLLMCAQSVYANDSRAATELLKQIRQHSSPFGDASQRVAHYFANGLDARLVGAGSGAHGIFSFLSSKRITAAEFLKAYQVFLSSTPFKKFTYFFANKMIMKAAAKSETIHIIDFGILYGFQWPILINFLSKRDGGPPKLRITGIEFPQPGFRPTEKNEETGHRLANYCQRYKVPFEYHAIASRNWETIQVEALKIESNEIVVVNCHMRFEHLLDESTVEVNSPRNAVLHLIRKINPDIFTHIIINGSYDAPFFTTRFREALFHYSAIYDMFDIVIPRENDWRLTIEGEILGREAMNVIACEGSDRVHRPETYKQWQVRNTRAGFKQLPLDEDLLAKFRIKLKEYHRDFVFDEDNNWMLQGWKGRIFNASTCWVPA 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02316 706 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 267 693 IPR005202 -
Spst2g02316 706 ProSiteProfiles GRAS family profile. 320 704 IPR005202 -
Spst2g02316 706 MobiDBLite consensus disorder prediction 247 271 - -
Spst2g02316 706 MobiDBLite consensus disorder prediction 247 263 - -
Spst2g02316 706 MobiDBLite consensus disorder prediction 302 323 - -
Spst2g02316 706 Pfam GRAS domain family 329 703 IPR005202 -
Spst2g02316 706 MobiDBLite consensus disorder prediction 299 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02316 Spst-Chr2 22513820 22516521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02316 82 706 GRAS Transcription Factor Family AT1G07530 45.821 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst2g02316 GRAS 4.3e-110 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02316 2 22513820 22516521 Spst2g02316 2 22513820 22516521 ECH
Spst2g02316 2 22513820 22516521 Spst5g00413 5 3296365 3298536 PCT