LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst2g02128	ATGACGCTATGGATTAAGGCAACGGGAGCATTGAAGGATAGGTATAGCATTTGGGTCGCCAAGCTCTCACCAAGTGGCCCATGTAGGAACCCTGATCTTGAAATGGTGATCATCAAGGCCACAAGCCATGATGAACAGTGCATGGATTACAAGAACGTTCAGAGGGTTTTTAAATGGCTTCGTACCTCACCTTTGTACATTAAGCCTCTTCTCTACACACTTACAATGAGGATGGAGAAGACTCGTTCGTGGGTGGTGGCAATCAAGGGGTTAATGCTCATTCATGGGGTGTTTTGTTTTGATCTTCCCGCGGTGAAAAACTTGGGAAGGTTACCATTTGATTTGTCACACTTTAGCGACCGACACATAAACCCTAAGAAGGCATGGGTTTTCAACGCGTTTGTTAGGTCTTATTTCAATTATTTGGACCAAAAATCAACGTTTGTGAGGATGGAAGCCATGAAAGAGACCAAACCAGGAAGCAAGGAGAAGGAAGAGAGTGTGATGGAAGAGTTGCAGAGCTTGGAGAAGTTTCTTGATTTGATCGATTTGCTTCTACAAGTCAAGCCTAGAAACCCTCACATGAACGTCGTGCTTATTCTCGAGGCCATGGATTGTGTCATGGACGAGATTTTGGAACTGTATGGAAAGTTTTGTGATAGGGTTCATCGAGTTGTGTCGAGGATAATTGACATGGGTGGCAAAGAGGAAGCTAGGGTTGGTCTGGATGTTGTGAGCAAAGCTGAATCGCAAGGGAGTAAGATCAAAACTTACTTCAACTTCTGTAGGAAGATTGGGGTACTTAATGGTTCGGAGTGCCCCGAAATTTTGAAGGTCGATGAGAAAGACATTGGTGAACTACTAAGAATTAGAGACGAGGAAAAAATGGAGGATAAGAACAGTGACAATAGCAAGAATTATGTTATGGCATGTGAGCATAACAAATGTAGAACTATAGTCACCTTTTCAGACACGAAAGAGTTGGATTTGAAGACTGTGATCACAGACCAATGGGAAGTGTTCGAAGATGATTTCATAGATATTATGAATGGTGACGCCAAGATCACAAGTTTCCCAATGACCTCAACATGTAACCCTTTTCTGGATTATTCTTTGAGCCTCGTACCCTATGTTTCAGCTTCCAACAACTGTGTTCTTCCTGATTTAATCATTTTGTAG	1179	0.4249	MTLWIKATGALKDRYSIWVAKLSPSGPCRNPDLEMVIIKATSHDEQCMDYKNVQRVFKWLRTSPLYIKPLLYTLTMRMEKTRSWVVAIKGLMLIHGVFCFDLPAVKNLGRLPFDLSHFSDRHINPKKAWVFNAFVRSYFNYLDQKSTFVRMEAMKETKPGSKEKEESVMEELQSLEKFLDLIDLLLQVKPRNPHMNVVLILEAMDCVMDEILELYGKFCDRVHRVVSRIIDMGGKEEARVGLDVVSKAESQGSKIKTYFNFCRKIGVLNGSECPEILKVDEKDIGELLRIRDEEKMEDKNSDNSKNYVMACEHNKCRTIVTFSDTKELDLKTVITDQWEVFEDDFIDIMNGDAKITSFPMTSTCNPFLDYSLSLVPYVSASNNCVLPDLIIL	392

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst2g02128	392	Pfam	ANTH domain	32	280	IPR011417	GO:0005543
	Spst2g02128	392	CDD	ANTH_N_AP180_plant	33	148	-	-
	Spst2g02128	392	FunFam	Putative clathrin assembly protein	7	153	-	-
	Spst2g02128	392	PANTHER	CLATHRIN ASSEMBLY PROTEIN	5	299	IPR045192	GO:0048268\|GO:0072583
	Spst2g02128	392	SUPERFAMILY	ENTH/VHS domain	32	152	IPR008942	-
	Spst2g02128	392	SUPERFAMILY	GAT-like domain	164	287	-	-
	Spst2g02128	392	Gene3D	-	4	154	IPR008942	-
	Spst2g02128	392	Gene3D	ANTH domain	155	311	IPR014712	GO:0005545\|GO:0030136\|GO:0030276\|GO:0048268
	Spst2g02128	392	ProSiteProfiles	ENTH domain profile.	25	156	IPR013809	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst2g02128	Spst-Chr2	20264075	20265253	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst2g02128	2	20264075	20265253	Spst2g02128	2	20264075	20265253	ECH