Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02115 ATGTCAACTTTGAGAATACCTCCAGTGATACCATCACCTCGAGAAGATGCTATCAAGCTGCATAAAGCTTTCAAAGGCCTTGGTTGTGATACGTCAAAAGTTATCAAAATCTTGGCTCACAGAAATGAAGAACAACGCAGTCTCATTCAACAAGAATATGAAACCAACTACTCTGAACTATTTTCCAAACGGATATCAAAAGAGCTTCATGGACATGCCAAGAAAGCAATGACACTTTGGCTGCATGAGCCTCCAGTTAGGGATGCTAAGGTAGTGAGAAAAGCCTTAAGAAGTACCCCAGCTGTTGATAATCACGCTTTAACAGAAACTATATGTTCTCGTACTCCATCACAGCTTAGACGATTAAAAGAAGTTTATCTGTCAACTTATCAGTCCCCTCTTGAGACAGACATTGAAAACCACACCAGTGGTGATCATAAGAAGTTGTTGATTGCATATATAACTACACCACGTTATGAAGGCCCAGAGTTGGATCCTGCACTTGTAGAGGAGGATGCGAAAGAACTGTATAAAGCAGGGGAGAAAAGGATGGGAACTGATGAGAAGACGTTCATCAAGATTTTTAGTGAAAAAAGTAGCACACATTTGACTGCAGTTAACTCTGCTTACAAAACTTCATATGGACACTCATTAGAAAAGGCAATAAAGAAAGAAACATCTGGCTCTTTTGCCAGTGGCCTCTTAGCCATACTTCGATGTGCAACTGATCCTGCTCTGTACTTTGCCAAGATTTTGCGGAAGTCAATGAAGGGTGTGGGAACTCAAGATAGGAGACTAATAAGGGTGGTTGTGACAAGGACTGAGATAGACATGTATCACATAAAAATAGCGTATTATAAGAAATATGGAAAACCATTAACTCATGCTGTTCGTTCTGACACATCAGGTCATTACAGAGATTTTCTCCTAAATCTTATAGCAATCTTGTACATCTGCATCTTCTTCGATGGGTTTTCTAACCACGAGTGTTGTCTCACCTCTCATGAGGTGCATCTAATTGGTGGTGCTTCCACTGATTTTGAGGGATCCTTGGCTGCCTCTGCTTCGTCAAAGAAGGTCATCATTGTTGCTCCAGTGGCTAAAAAGTGCAAAGAGGTGATGGGAAGTTCTTTCAATTATAAGAAGGTTTGTGCTAAGGTAGATGTGGCTCATATTGATGTAGTTGTCAAATGA 1194 0.4054 MSTLRIPPVIPSPREDAIKLHKAFKGLGCDTSKVIKILAHRNEEQRSLIQQEYETNYSELFSKRISKELHGHAKKAMTLWLHEPPVRDAKVVRKALRSTPAVDNHALTETICSRTPSQLRRLKEVYLSTYQSPLETDIENHTSGDHKKLLIAYITTPRYEGPELDPALVEEDAKELYKAGEKRMGTDEKTFIKIFSEKSSTHLTAVNSAYKTSYGHSLEKAIKKETSGSFASGLLAILRCATDPALYFAKILRKSMKGVGTQDRRLIRVVVTRTEIDMYHIKIAYYKKYGKPLTHAVRSDTSGHYRDFLLNLIAILYICIFFDGFSNHECCLTSHEVHLIGGASTDFEGSLAASASSKKVIIVAPVAKKCKEVMGSSFNYKKVCAKVDVAHIDVVVK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02115 397 Gene3D Annexin 244 314 IPR037104 GO:0005509|GO:0005544
Spst2g02115 397 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Spst2g02115 397 ProSiteProfiles Annexin repeat profile. 243 314 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 ProSitePatterns Annexin repeat signature. 260 312 IPR018252 GO:0005509|GO:0005544
Spst2g02115 397 Gene3D Annexin 83 154 IPR037104 GO:0005509|GO:0005544
Spst2g02115 397 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Spst2g02115 397 PRINTS Annexin family signature 176 202 IPR001464 GO:0005509|GO:0005544
Spst2g02115 397 PRINTS Annexin family signature 300 313 IPR001464 GO:0005509|GO:0005544
Spst2g02115 397 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Spst2g02115 397 PRINTS Annexin family signature 93 114 IPR001464 GO:0005509|GO:0005544
Spst2g02115 397 PRINTS Annexin family signature 256 276 IPR001464 GO:0005509|GO:0005544
Spst2g02115 397 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 SMART annex3 260 312 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 SMART annex3 185 237 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 SMART annex3 101 153 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 PANTHER ANNEXIN 12 312 - -
Spst2g02115 397 Pfam Annexin 88 152 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 Pfam Annexin 16 78 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 Pfam Annexin 247 312 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 Pfam Annexin 172 237 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 ProSiteProfiles Annexin repeat profile. 83 155 IPR018502 GO:0005509|GO:0005544
Spst2g02115 397 FunFam Annexin 244 314 - -
Spst2g02115 397 FunFam Annexin 158 243 - -
Spst2g02115 397 SUPERFAMILY Annexin 2 314 IPR037104 GO:0005509|GO:0005544
Spst2g02115 397 Gene3D Annexin 158 243 IPR037104 GO:0005509|GO:0005544
Spst2g02115 397 ProSiteProfiles Annexin repeat profile. 167 239 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02115 Spst-Chr2 20213100 20216653 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02115 2 20213100 20216653 Spst2g02115 2 20213100 20216653 ECH