Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02110 ATGGCTGCCACATTCTTCTCTCAATTGTCTCTTCTTCAAGCGAACAACCCTTATCCTTCTTCTCTCTCTCCTCGCATCCCTCATTCTCTTGCCAACCGTATCAAACCCTCCTCCCTCGGGGTGGTTTCTGTGGGCAAAAGAGCAATAGGGGTGGTGCCAAAGGCTGCTCTGAATGCCTTGGAAACTAATTCGGATTTCCCCATTTCGGCTAAGAAGTTCAACGACAACCCCATTGTTGTTATTGATAACTATGACAGCTTTACCTATAATCTTTGCCAGTATATGGGGGAGTTAGGATTTCACTTTGAGGTCTACCGCAATGATGAGTTGACAGTGGAGGAGTTAAAAAGGAAAAATCCTAGAGGAGTGCTGATATCACCCGGACCAGGGGAACCTCAAGATTCTGGCATATCTTTGCAAACAGTTTTGGAGCTTGGACCAACTGTACCTTTGTTTGGTGTGTGCATGGGTTTGCAGTGCATTGGTGAGGCTTATGGAGGGAAGATTGTTCGTTCTCCTTATGGTGTCATGCATGGAAAAAGTTCCTTGGTTTACTATGATGAGCAAGGAGAAGATGGAGTACTTGCTGGACTGTCAAATCCTTTCTTGGCTGGTAGATATCACAGCCTTGTAATTGAGAAAGAGAGTTTTCCTGATGAACTTGAGGCAACAGCCTGGACAGAAGATGGTCTAATAATGGCTGCTCGCCATAAGAAATATAAGCATCTACAGGGAGTTCAGTTTCATCCTGAGAGCATCATAACTCCAGAAGGCAAGAAAATTGTCCACAATTTTGTCAAGCTTATTGAGAGAATGGAGGCTGGTGGTTCTTGA 834 0.446 MAATFFSQLSLLQANNPYPSSLSPRIPHSLANRIKPSSLGVVSVGKRAIGVVPKAALNALETNSDFPISAKKFNDNPIVVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGEPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAYGGKIVRSPYGVMHGKSSLVYYDEQGEDGVLAGLSNPFLAGRYHSLVIEKESFPDELEATAWTEDGLIMAARHKKYKHLQGVQFHPESIITPEGKKIVHNFVKLIERMEAGGS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02110 277 CDD GATase1_Anthranilate_Synthase 78 266 IPR006221 -
Spst2g02110 277 Pfam Glutamine amidotransferase class-I 79 266 IPR017926 -
Spst2g02110 277 Gene3D - 76 268 IPR029062 -
Spst2g02110 277 SUPERFAMILY Class I glutamine amidotransferase-like 78 271 IPR029062 -
Spst2g02110 277 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 78 267 IPR006221 -
Spst2g02110 277 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 120 134 - -
Spst2g02110 277 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 150 166 - -
Spst2g02110 277 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 70 273 - -
Spst2g02110 277 PRINTS Glutamine amidotransferase superfamily signature 123 132 - -
Spst2g02110 277 PRINTS Glutamine amidotransferase superfamily signature 245 258 - -
Spst2g02110 277 PRINTS Glutamine amidotransferase superfamily signature 150 161 - -
Spst2g02110 277 PRINTS Anthranilate synthase component II signature 78 92 - -
Spst2g02110 277 PRINTS Anthranilate synthase component II signature 150 161 - -
Spst2g02110 277 PRINTS Anthranilate synthase component II signature 245 258 - -
Spst2g02110 277 PRINTS Anthranilate synthase component II signature 123 132 - -
Spst2g02110 277 PRINTS Anthranilate synthase component II signature 176 184 - -
Spst2g02110 277 PRINTS Anthranilate synthase component II signature 199 211 - -
Spst2g02110 277 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 77 275 - -
Spst2g02110 277 FunFam Anthranilate synthase beta subunit 1 76 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02110 Spst-Chr2 20150643 20154615 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02110 2 20150643 20154615 Spst2g02110 2 20150643 20154615 ECH