Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02109 ATGGGAGGGGCTCACATGGGGTGGTTCCTCTTGTGTTCTTCTTCTCTGCTTCTTTTTGCTGTCATGGCTTCAACTGGGTCACTCACAAACTTGCCCATCATAGCCTTTGAGGATGGCTACACCCCCTTGTTTGGGGACCATAATTTGGCCATCCATAGAGATGGCAAATCAGTTCACCTTTCACTTGATGAAAGAACAGGTTCTGGATTTGTGTCTCATGACCTTTACCTTCATGGCTACTTCAGTGCCTCGATTAAGTTGCCTTCTGATTACACAGCTGGAGTTGTGGTTGCATTTTATATGTCTAATGGTGACATGTTCCAGAGTAACCATGATGAGATAGACTTTGAGTTTTTGGGTAACATTAGAGGCAAAGACTGGAGGATTCAGACCAATGTTTATGGCAATGGAAGTACCAACATTGGTAGAGAGGAAAGATGTGGCCTATGGTTTGATCCTGCTGAGGATTTCCATCAGTATAGTATTCTCTGGACTGATTCTAAGATCATATTTTCCGTGGATGATGTACCTATTAGGGAAGTAAAGAGAACAGAATCTATGGGAGGAGATTTCCCCTCAAAGCCAATGACTTTGTATGCTACCATATGGGATGCATCTGATTGGGCAACTAATGGAGGCAAATATAGAGTAAATTACAAGTATGCACCCTATGTTGCTGAGTTCTCGGACTTTGTCCTGCATGGTTGTGCAGTTGATCCCATTGAGCATGTGACCAAGTGTGACAGTAGTGCCCAAGATTCTGAGGCAGTTCCTGCTGATATCACCCCAGTACAAAGAACCAAGATGAGGAACTTCAGGTTGAAGCACATGACATACTCTTACTGCTATGACACAGGTAGATACAAAGTCCCTCCACCAGAGTGTGTCATCAACCCTCAAGAAGCTGAAAGGCTAAGAAAATTTGATCCGGTCACGTTCGGCAATGGCCGGCGCCACCGTGGAAAACGACACCACCGTATTAGAGGAAGCCAGGAAGAGGCTGCTTCTTCATTTTAA 1017 0.4464 MGGAHMGWFLLCSSSLLLFAVMASTGSLTNLPIIAFEDGYTPLFGDHNLAIHRDGKSVHLSLDERTGSGFVSHDLYLHGYFSASIKLPSDYTAGVVVAFYMSNGDMFQSNHDEIDFEFLGNIRGKDWRIQTNVYGNGSTNIGREERCGLWFDPAEDFHQYSILWTDSKIIFSVDDVPIREVKRTESMGGDFPSKPMTLYATIWDASDWATNGGKYRVNYKYAPYVAEFSDFVLHGCAVDPIEHVTKCDSSAQDSEAVPADITPVQRTKMRNFRLKHMTYSYCYDTGRYKVPPPECVINPQEAERLRKFDPVTFGNGRRHRGKRHHRIRGSQEEAASSF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02109 338 FunFam Xyloglucan endotransglucosylase/hydrolase 23 297 - -
Spst2g02109 338 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 259 295 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Spst2g02109 338 PIRSF EndGlu_transf 3 300 IPR016455 GO:0010411|GO:0016762|GO:0042546
Spst2g02109 338 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 299 IPR013320 -
Spst2g02109 338 Gene3D - 23 295 - -
Spst2g02109 338 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 26 228 IPR000757 GO:0004553|GO:0005975
Spst2g02109 338 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 30 295 IPR044791 GO:0004553
Spst2g02109 338 Pfam Glycosyl hydrolases family 16 38 220 IPR000757 GO:0004553|GO:0005975
Spst2g02109 338 MobiDBLite consensus disorder prediction 309 338 - -
Spst2g02109 338 CDD GH16_XET 34 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02109 Spst-Chr2 20144190 20146640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02109 16 328 Glycoside Hydrolase AT2G01850 69.745 4.16e-166 464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02109 2 20144190 20146640 Spst2g02109 2 20144190 20146640 ECH