Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02106 ATGATTGGAGCCAAAGATCTTGTTCCCAATGGCGTGGACACCGAGGGGGAGAACTCAAGGAGCAAGGTGCAGCATCAACATCAGCAGCATCATGATTTTTCTCATGGCAAGGAACACCCGCAAGAGAAAAAACAAAGTTACCCAGAGAAGAAGGTTGGTGTTGATGAGTTTCAGTCGCCACCCACCAAATTTGCCTCTTCTGGGTTGCAAGAGTTGACCCTCAGCTACCTCTGTGACAACCCAAAATTAAGTCTTGTTGAGAAAGAGGTTGGTGGTCGAAACTTGGGGAAAGGCAAAGAAGTTGTGGTTTATGGGAATTCAGATCAAGATCAAGATGAGTTAAGGTTTAAATCATCTTTAGAAGAGGTGCCCGCATTTAGTGCACGGCAATACTTCGAACAGGATTGTCTCCGTAGGAAGATAGCTGTCGGGAACCAAAAGCAAGATCAAGATGCGAAATGGGTAGAGAGGGATTTCCTGAGTTTGAGTGAGTCACGGGAGAATTCTTCCAAGAGATCCATTGAGGAAGAGTGTGAGAGGGACAAGAGTGGTGGCAGCAAGAAGCAGAAGCTTGAGACTCTTAGTCTCTCTCTTGCTTTGCCTGATGTGTCCCTCTCTCTCACAGCCTCGAACGCCTTGCAAAACGGTGACCAACTTGTTAGGCCAAAGCCTGGTATGGCATCCACAAGGCCCACAGCTACGATCAATTCATGTTCAAATGATTACACTGTAGCTTCTATGTCTCACTCTTACTCTCACCCTTTCTCACACAACCCAAGTTGCTCACTCACTCGAAATTCAACCGACAATTTTGAGTATTCACACAGCAAAGATGATCAAATTTGGCATTGTGGGGAGGGGACTAACGGTTCTGTTCATAGCAGTTTCAAGCCGATAGGAGATGGGGTTGCTTTCGCCAATCATTCCTTTATGCAAGGGAATAGTCACTATAAGGGTACTAGCTCAGATACCCAGTCTTTTTTCCCTTCAGAATTGCCTGCAAGGGTGAGATTTGAAGCTCAGTCTGAGGGCTCAAGGGGAAAGAACTCTGAGAATCTGAGAGCCTTGGAAGGTGTGGATGGTGGGAATATTATGAAGTTTTCTAGATCAGAGAGAGTTCTAAGAGAAATTGTGTCTGAGAGTATCCCAGCCATGGCATTGACATTTCAGGAGTTTACTGATGAAATCATAACTTCAATTAAGGAACACTTGAAAGGTCTCATCGATATGCCAGAGAAGAAAGCGGAATTGTTGAACCTCCAGAACCGGCTTGGCCGAAGATCGGATATCACCAGAGAGACTCTTTCGAAGTGTCATAAAGAGCAGCTACAGATTTTGGCTGCTATCAAGATGGGGCTTGTTAGTTTCTTGTCTGGTAAGTTCCAATTCTTGGAGATGGTGGAGGTTTTCTTGTATATGAGATGTAGAAATGTGAACTGCAAGAGCTTACTGCCTGTTGATGACTGTGACTGCAAGATGTGCTCAGGAAATAAGGGGTTCTGCAGTTCTTGCATGTGTCCTGTTTGTATGAGCTTTGATTGTGCAAGTAACACTTGTAGTTGGGTTGGTTGTGATGTTTGCTCCCACTGGTGTCATGCCACCTGTGCCATTCAGAAGAATCTAATCAAACCCGGGCCTAGCTTGAAGGGTCCTTCTGGGACCTCTGAGGTGCAGTTTCATTGTATTGGCTGTGAACATACTTCAGAAATGTATGGCTTTGTGAAAGATGTCTTTGTGTATTGTGCCAAGGATTGGGGCCTAGAAACATTGGTAAAGGAGCTTGACTGTGTGAGGAGGATTTTTCAGGGAAGTGAAGATCGCAAAGGGAAGGAATTGCATTTTAAGATGGATGATATACTGTCAAAACTTCAAGCCAAACTGGTTTCTCCTTCGGATGCCTGTAACTACATCATACAGTTTTTCAGCTACGCAGATGGCATGTCAAACTTCCCAACTTCTGGTATATCCTCAAAGGATTTGCCAAAATCTAAGGCTAGTCGTACAATAGACACAACATCATCTCTTCCACAATCTACTTCTCTAATACCAAAGTACACTTATGACACGCGCTTCACTAGGTCAAATGATCTTCAACAGAAAGACCTCAAAACCTCCCTCTTGAGTGAACAAAAAACTGAGTCTGATTTCCACCTTGAGGCTTTACTAAGGAAAGGAGGAGGGCTTGAAAGCTTGGAGAGCATCATTCGAATAAAAGAGGCCGAAGCCGGAATGTTTCAGAGCAAGGCAGATGAGGCAAGGAGAGAAGCGGAGGGATTCCAGAAGATGATCAAGACAAAGGCTGCACAAATGGAAGAGGAGTATGCAGAAAGGCTTGGCAAGCTTTGCTTGCACGAGGCAGAGGAAAGGAGGAAGAAGAAATTTGAGGAACTCAACGTCTTGCAAAATTCACACTACGATTACTTCAACATGAAAAGCAGAATGCAAGATGAGATTCATGGTTTGTTGAAGAGAATGGAAGCAACAAAGCAGCAATGGGTTTGA 2502 0.4444 MIGAKDLVPNGVDTEGENSRSKVQHQHQQHHDFSHGKEHPQEKKQSYPEKKVGVDEFQSPPTKFASSGLQELTLSYLCDNPKLSLVEKEVGGRNLGKGKEVVVYGNSDQDQDELRFKSSLEEVPAFSARQYFEQDCLRRKIAVGNQKQDQDAKWVERDFLSLSESRENSSKRSIEEECERDKSGGSKKQKLETLSLSLALPDVSLSLTASNALQNGDQLVRPKPGMASTRPTATINSCSNDYTVASMSHSYSHPFSHNPSCSLTRNSTDNFEYSHSKDDQIWHCGEGTNGSVHSSFKPIGDGVAFANHSFMQGNSHYKGTSSDTQSFFPSELPARVRFEAQSEGSRGKNSENLRALEGVDGGNIMKFSRSERVLREIVSESIPAMALTFQEFTDEIITSIKEHLKGLIDMPEKKAELLNLQNRLGRRSDITRETLSKCHKEQLQILAAIKMGLVSFLSGKFQFLEMVEVFLYMRCRNVNCKSLLPVDDCDCKMCSGNKGFCSSCMCPVCMSFDCASNTCSWVGCDVCSHWCHATCAIQKNLIKPGPSLKGPSGTSEVQFHCIGCEHTSEMYGFVKDVFVYCAKDWGLETLVKELDCVRRIFQGSEDRKGKELHFKMDDILSKLQAKLVSPSDACNYIIQFFSYADGMSNFPTSGISSKDLPKSKASRTIDTTSSLPQSTSLIPKYTYDTRFTRSNDLQQKDLKTSLLSEQKTESDFHLEALLRKGGGLESLESIIRIKEAEAGMFQSKADEARREAEGFQKMIKTKAAQMEEEYAERLGKLCLHEAEERRKKKFEELNVLQNSHYDYFNMKSRMQDEIHGLLKRMEATKQQWV 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02106 833 Coils Coil 811 831 - -
Spst2g02106 833 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 466 487 IPR004082 -
Spst2g02106 833 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 585 604 IPR004082 -
Spst2g02106 833 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 427 442 IPR004082 -
Spst2g02106 833 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 768 790 IPR004082 -
Spst2g02106 833 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 512 532 IPR004082 -
Spst2g02106 833 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 729 749 IPR004082 -
Spst2g02106 833 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 388 410 IPR004082 -
Spst2g02106 833 MobiDBLite consensus disorder prediction 18 51 - -
Spst2g02106 833 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 23 832 IPR004082 -
Spst2g02106 833 Coils Coil 783 803 - -
Spst2g02106 833 Pfam Coiled-coil region of Oberon 694 822 IPR032535 -
Spst2g02106 833 CDD PHD_OBE1_like 505 564 IPR047578 -
Spst2g02106 833 Pfam PHD - plant homeodomain finger protein 475 599 IPR032881 -
Spst2g02106 833 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02106 Spst-Chr2 20128530 20132153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02106 397 714 PHD Gene Family AT5G57380 22.188 1.64e-08 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02106 2 20128530 20132153 Spst2g02106 2 20128530 20132153 ECH