Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02098 ATGGGTCTTAGTTTGAAGATGCAGAGCCACCATTCTGTGGCCTTGAGGTTGCATGATCAAATGGGGTCTAAAAGGAAGTACACTTTCATTCAGGCTCATAGAGCTTGGCTTCCCAAGTTCTTGCTGCTATGGATCCTGCTAATGGCTTTGATCAGTTGGTGCATCTTTAGCAAAATAGATGACGACACTAAAGTCAGAAGGAAGGAGGTGTTGGGTAGCCTCTGTGATCAAAGGGCAAGAATGCTACAAGATCAGTTTATTGTTAGTGTTAACCATGTCCATGCCCTTGCCATCCTTGTTTCAACCTTCCATTACTACAGATACCCTTCTGCCATTGACCAGGAAACCTTTGCTGAGTATACAGCACGGACAGCATTTGAACGGCCATCACTGAGTGGTGTGGCATATGCACAAAGAGTTGTTAAGTCCGAGAGAGAGAGATTTGAGAAAGAACATGGATGGGTTATAAAGACAATGGAAGAAAAGTCTTCACTGGTTAGAGATGAGTATGCTCCGGTGATATTTGCACAAGAAACTGTCTCATATCTTGAGTCTCTTGATATGATGTCTGGAGAGGAAGACCGAGAAAACATTTTAAGGGCTAGAGCCACTGGGAAAGCAGTTCTGACTAGCCCTTTCAGGCTGTTGGGTTCTCACCATCTTGGTGTAGTTTTAACATTTCCTGTGTACAAGTCTAAGCTTCCTCAGAAGCCAACGGTGGAGGAACGTATTGAAGCTACCGCAGGATATGTTGGAGGATCCTTTGATGTTGAGTCCCTTGTTGAGAATTTACTTGGGCAACTTGCTGGTAACCAAGCAATTTTGGTGAATGTATATGATATCACAAACTATACTAATCCACTAATAATGTATGGCAAGCCCTATGAAGAAGGTGATATGTCTCTTGCGCATGAAAGCAAGCTTGATTTTGGAGATCCATACAGGAAACATCAAATGATATGTAGGTACCATCAGAAGGCACCGACAAATTGGATAGCTCTTACCACGGCATTCCTATTCTTTGTGATTCTTATATTAGTGGGTTACATTTTATATGGTGCTGGAAATCATATTGTGAAAGTCGAAGATGATTTCCAAAAGATGTCAGAATTAAAAGTTCGAGCGGAAGCAGCCCATGTTGCCAAGTCCCAGTTTCTGGCTACAGTCTCTCATGAAATTAGAACACCCATGAATGGTATTTTAGGAATGCTTGGTCTGCTTCTAGATACAGAATTGAGTTCAACCCAACGGGACTATGCTCAGACTGCTCAAGCATGTGGAAAGGCACTGATAACATTAATAAATGAGGTCCTGGACAGAGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAGGCTGTTCCATTTGATCTTCGTTCCATACTTGATGATGTCCTTTCCCTTTTTTCTGAGAAATCTAGACACAAAGGTTTAGAGCTTGCTGTGTTTGTTTCTGATGAAGTTCCGGATATTGTCATGGGAGATCCTGGGAGATTCAGACAAATAATAACAAATCTTGTTGGCAACTCTGTTAAATTTACTGAACACGGACATATATTTGTCAAAGTCCATCTGGCGGACAATAGAAAGTCCATAATGAATGGAAAGCACGAGACTTTTCTCAACGGAGAATCAGATGAAGTTTTCCATATATCTGATAGTTCTGAGTTCAAAACCTTAAGTGGACGTGAAGCAGCTGATGAACGGAACAGCTGGGATAATTTTAAGCACCTAATTGACGAAGAAAAATGTTGCTTTGATTCTTCAAGAGAAACGGAGGCTACTTGTGAAACATCTGAGCAAGTCACCTTGAGGGTGTGTGTGGAGGACACTGGAATTGGAATTCCTTTTTCAGCACAGGATAGAATATTCATGCCTTTTGTGCAGGCTGACAGCTCAACTTCACGAAATTATGGGGGTACTGGTATTGGCTTGAGTATCAGTAAATGTCTGGTTGAACTAATGGGTGGTAAGATAAACTTCATTAGTCGACCCCAAGTTGGGAGCACTTTCTCGTTTAATGCAGTTTGTGGAACATTTAAGAAAAGTTCGGTTACTGCTGACATGAAGAAAAATTTGGAAGATCTTCCTTCAAGTTTTAGAGGGCTGAAAGTCATTGTCGTTGATGGAAAACCTGTTAGAGCTGCTGTGACTAGATACCATTTGAAGAGACTAGGTATACTAGTTAAAGTTGCAAATAGCATCAGTAAGGCTGTTGCTTTATGTGGTAAAAGCAGTTCTTTGAACTCAGAAATGTTCCAGCCAGATATTATCATGGTTGAGAAGGACACATGGATATCTGGAGAGGATGGGATTTTCAATATACGGAAACTGGACTGGAAACAAAATGGTCACGTGTTTAAGGTGCCTAAAATGATCCTTCTGGCAACCAATATTAGCAACACTGAATTTGATGAAGCTAAGGCTACGGGTTTCACAGACACTGTGATCATGAAGCCTCTGAGAGCTAGTATGGTGGCTGCTTGTCTTCAGCAAGTTTTGGGGATGGGGAAGAAGAGGCAGCTTGGGAAAGACTTACCTAATGGTTCTGCTTTTCTGCATAGCCTTCTCTATGGAAAGAAAATCCTGGTGGTTGATGACAATGGGGTAAACCGCAGGGTTGCTGCAGGTGCTCTGAAAAAGTTTGGAGCGGCTGTGAAGTGTGCTGAAAGTGGCAAAGCGGCCCTTGAAATGCTGCAATTGCCTCACAATTTTGATGCTTGCTTCATGGACATTCAAATGCCAGAAATGGACGGATTTGAAGCAACGAGCCGAATTCGAATGATGGAGAGCAAGGCAAATGAGGAGATGAACAATGGGAGTGAATGGCATGTGCCTATATTGGCCATGACAGCTGATGTGATCCATGCTACATATGATGAGTGCTTGAAACGTGGTATGGATGGATATGTCTCAAAGCCATTTGAGGAAGAGAATCTGTACCAAGAAGTTGCAAAATTTTTCAAATCAAAGACCATCTCAGACTCATCACAATCTGCTTCTTACTTGGCAACCAACTAG 3018 0.4205 MGLSLKMQSHHSVALRLHDQMGSKRKYTFIQAHRAWLPKFLLLWILLMALISWCIFSKIDDDTKVRRKEVLGSLCDQRARMLQDQFIVSVNHVHALAILVSTFHYYRYPSAIDQETFAEYTARTAFERPSLSGVAYAQRVVKSERERFEKEHGWVIKTMEEKSSLVRDEYAPVIFAQETVSYLESLDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPQKPTVEERIEATAGYVGGSFDVESLVENLLGQLAGNQAILVNVYDITNYTNPLIMYGKPYEEGDMSLAHESKLDFGDPYRKHQMICRYHQKAPTNWIALTTAFLFFVILILVGYILYGAGNHIVKVEDDFQKMSELKVRAEAAHVAKSQFLATVSHEIRTPMNGILGMLGLLLDTELSSTQRDYAQTAQACGKALITLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDEVPDIVMGDPGRFRQIITNLVGNSVKFTEHGHIFVKVHLADNRKSIMNGKHETFLNGESDEVFHISDSSEFKTLSGREAADERNSWDNFKHLIDEEKCCFDSSRETEATCETSEQVTLRVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGKINFISRPQVGSTFSFNAVCGTFKKSSVTADMKKNLEDLPSSFRGLKVIVVDGKPVRAAVTRYHLKRLGILVKVANSISKAVALCGKSSSLNSEMFQPDIIMVEKDTWISGEDGIFNIRKLDWKQNGHVFKVPKMILLATNISNTEFDEAKATGFTDTVIMKPLRASMVAACLQQVLGMGKKRQLGKDLPNGSAFLHSLLYGKKILVVDDNGVNRRVAAGALKKFGAAVKCAESGKAALEMLQLPHNFDACFMDIQMPEMDGFEATSRIRMMESKANEEMNNGSEWHVPILAMTADVIHATYDECLKRGMDGYVSKPFEEENLYQEVAKFFKSKTISDSSQSASYLATN 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02098 1005 Pfam His Kinase A (phospho-acceptor) domain 381 446 IPR003661 GO:0000155|GO:0007165
Spst2g02098 1005 Gene3D - 355 444 - -
Spst2g02098 1005 SMART HKATPase_4 493 678 IPR003594 -
Spst2g02098 1005 CDD HATPase_EvgS-ArcB-TorS-like 498 672 - -
Spst2g02098 1005 ProSiteProfiles Response regulatory domain profile. 703 833 IPR001789 GO:0000160
Spst2g02098 1005 Gene3D - 854 995 - -
Spst2g02098 1005 Gene3D - 697 837 - -
Spst2g02098 1005 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 435 672 IPR036890 -
Spst2g02098 1005 ProSiteProfiles Response regulatory domain profile. 860 987 IPR001789 GO:0000160
Spst2g02098 1005 FunFam Histidine kinase 4 353 444 - -
Spst2g02098 1005 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 447 IPR036097 GO:0000155|GO:0007165
Spst2g02098 1005 PANTHER TWO-COMPONENT HISTIDINE KINASE 23 984 - -
Spst2g02098 1005 PRINTS Bacterial sensor protein C-terminal signature 603 617 IPR004358 GO:0016310|GO:0016772
Spst2g02098 1005 PRINTS Bacterial sensor protein C-terminal signature 621 631 IPR004358 GO:0016310|GO:0016772
Spst2g02098 1005 PRINTS Bacterial sensor protein C-terminal signature 662 675 IPR004358 GO:0016310|GO:0016772
Spst2g02098 1005 PRINTS Bacterial sensor protein C-terminal signature 638 656 IPR004358 GO:0016310|GO:0016772
Spst2g02098 1005 ProSiteProfiles Histidine kinase domain profile. 388 672 IPR005467 -
Spst2g02098 1005 SMART CHASE_2 108 293 IPR006189 -
Spst2g02098 1005 SUPERFAMILY CheY-like 858 987 IPR011006 -
Spst2g02098 1005 Pfam CHASE domain 111 291 IPR006189 -
Spst2g02098 1005 FunFam Histidine kinase 4 112 327 - -
Spst2g02098 1005 Gene3D - 59 111 - -
Spst2g02098 1005 SMART HisKA_10 381 446 IPR003661 GO:0000155|GO:0007165
Spst2g02098 1005 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 674 IPR003594 -
Spst2g02098 1005 Pfam Response regulator receiver domain 861 983 IPR001789 GO:0000160
Spst2g02098 1005 CDD HisKA 381 442 IPR003661 GO:0000155|GO:0007165
Spst2g02098 1005 SUPERFAMILY CheY-like 698 834 IPR011006 -
Spst2g02098 1005 Gene3D - 445 678 IPR036890 -
Spst2g02098 1005 Gene3D CHASE domain 112 327 IPR042240 -
Spst2g02098 1005 ProSiteProfiles CHASE domain profile. 108 320 IPR006189 -
Spst2g02098 1005 SMART REC_2 859 983 IPR001789 GO:0000160
Spst2g02098 1005 CDD REC_hyHK_CKI1_RcsC-like 861 983 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02098 Spst-Chr2 20093131 20098699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02098 11 996 Histidine Kinase Gene Family AT2G01830 70.900 0.0 1393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst2g02098 HATPase_c 2.2e-30 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02098 2 20093131 20098699 Spst2g02098 2 20093131 20098699 ECH