Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02094 ATGTCATTGCTTCTTGCACGCCATACTCTACAGAATGTCATCAGAGAATACCTTAAATTAACAATTTGTGTGCAGGTCACTTTGGACTATGCTGATCAAAGAGCTGAAGCTATTCCCCAATCCACCGGATCACCAACTTGGACTATTCATGTGTCAGATATAAGAACAGTTAAGGTTAGCAACATATCACTGGTTACTTCCAAGATGGATATTCTAGAATTCTTTTCATTCTCAGGTGATATTCGGTATATTGAGATGCAAAGGGAAAGTGACCGCACTCAGGTGGCTTATGTTACATTTAAGGATACACAGGGAGCAGACACAGCAGTTCTATTAACGGGTTCAAAGATAGGTGATCTATATGTCACCATAACGCCTGTGGAGAAGTATCAGCTGCCTCCTGATGTTCTTCCGGCAAGTCCGACAAATCAAAGTGCCGATGCAGTAAAGAAGGCTGAAGATGTAATGAGCACCATGCTTGCTAAGGGTTTCATTTTAGGAAAGGATGCTATCAACAAGGCAAAATCCTTTGATGAGCGTCACCAGTTGAGCTCAAATGCATCTTCCACAGTTGCTTCCATTGATCGTAGAATGGGTTTCAGTGACAAATTAAGTATTGGAACAGCTATTGTGAATGGAAAGGTGAGAGAGATGGATGAAAAGTATCAGCTTTCTGAAATGACAAAGTCTGCTATTGCCACTGCAGAACAAAAGGCAAGCAGTGCTGGATCTGCTATCATGAGCAATCCTTATGTATTAACTGGGGCTTCATGGGTGTCTAGTGCCTTCACTGCTATAGCAAAGGCAGCCGGGGATGTCAGCACGATGACAAAGGAGAAGGTTGAACAGGCTGAGGTAGAAAGGAACGGGATCATTTATAATGAAAGGAAATGGCCTGAAGATGAATTTTCAAAGAAACACTTTGAGGATGCTTCAGACATGGGCCCTGCAATAGTTCCTGTTAATTCACATGATGACCATAAGCTGGAAATCATATAA 999 0.4204 MSLLLARHTLQNVIREYLKLTICVQVTLDYADQRAEAIPQSTGSPTWTIHVSDIRTVKVSNISLVTSKMDILEFFSFSGDIRYIEMQRESDRTQVAYVTFKDTQGADTAVLLTGSKIGDLYVTITPVEKYQLPPDVLPASPTNQSADAVKKAEDVMSTMLAKGFILGKDAINKAKSFDERHQLSSNASSTVASIDRRMGFSDKLSIGTAIVNGKVREMDEKYQLSEMTKSAIATAEQKASSAGSAIMSNPYVLTGASWVSSAFTAIAKAAGDVSTMTKEKVEQAEVERNGIIYNERKWPEDEFSKKHFEDASDMGPAIVPVNSHDDHKLEII 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02094 332 Gene3D - 51 125 IPR012677 -
Spst2g02094 332 SMART rrm1_1 56 125 IPR000504 GO:0003723
Spst2g02094 332 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 54 284 - -
Spst2g02094 332 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 55 129 IPR000504 GO:0003723
Spst2g02094 332 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 58 119 IPR000504 GO:0003723
Spst2g02094 332 SUPERFAMILY RNA-binding domain, RBD 44 131 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02094 Spst-Chr2 20053355 20055877 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02094 2 20053355 20055877 Spst2g02094 2 20053355 20055877 ECH