Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02092 ATGGGAGAAAAGGGTGTTGCTGGGGGAAGTGAAGACATTGCTGGTGGGAAAGAAAATGAACAAGTTCTAAAGAAGATTATCGCAACTCATCCTTTGTATGAAGTTTTGATTCAATCTCACATCAACTGCTTGAAGGTGGGGTTAAGTGAAGGTGGAGAGTTTGATGCAACAAGTGATGATGCATGGAAGAAGCTGGTCAACTCCAAGTCCAAAGCAACTCCTAGTCCAAACACTTCAGAATTAGATCACTTCATGGAAGCGTATTGCATGGCACTGAGCAAGCTGAAGGAAGCCATAGAAGAACCAACAAAAGAAACCAACGCTTTCATCAGAGCAACGTATCTTCAACTAAAGCAACTGGATGAACTGAACCACCCATAA 381 0.4252 MGEKGVAGGSEDIAGGKENEQVLKKIIATHPLYEVLIQSHINCLKVGLSEGGEFDATSDDAWKKLVNSKSKATPSPNTSELDHFMEAYCMALSKLKEAIEEPTKETNAFIRATYLQLKQLDELNHP 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02092 126 Pfam KNOX2 domain 79 120 IPR005541 GO:0003677|GO:0005634
Spst2g02092 126 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 16 124 - -
Spst2g02092 126 SMART KNOX2_2 68 122 IPR005541 GO:0003677|GO:0005634
Spst2g02092 126 Pfam KNOX1 domain 23 47 IPR005540 GO:0003677|GO:0005634
Spst2g02092 126 SMART KNOX1_2 21 67 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02092 Spst-Chr2 20042746 20043351 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02092 21 120 Homeobox Transcription Factor Family AT4G08150 33.333 3.53e-12 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02092 2 20042746 20043351 Spst2g02092 2 20042746 20043351 ECH