Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02083 ATGGTCTCAAAGTCCTATTCAAACCTACTGGAGTTGGCCTCTGGAGAGGCTCCTTCATTTGGTTACATGAACAGGAGAATTCCAAGAATTATGACTGTGGCTGGGTTGATATCAGATGTTGATGATGACCCAGTGGATAGTGTGTGCTCTGATCCGTCATCGTCGTCAGCGCACCGTGACCGAATAATCATGGTGGCTAATCAGCTTCCTATAAGGGCTCAGAGGAGGCCAGATGGAAATAGGAGTTGTTGGTCTTTCGAGTGGGATGAAAATGCCCTTCTTCAGCTGAAAGACGGGTTAGGGGATGATGATATTGAGGTTATTTATGTTGGATGTCTTAAGGAGGAGGTGCATCCAAGTGAACAAGATGAGGTTTCACAGACACTTCTTGAGACCTTCAAGTGTGTCCCAACTTTTCTCCCAGCTGACCAGTTTACTAAGTACTATCACGGTTTTTGCAAGCAGCAGTTGTGGCCACTGTTTCATTATATGTTGCCCTTGTCACCAGAACTTGGTGGGAGGTTTAATAGGTCACTGTGGCAAGCTTATGTGTCAGTCAATAAAATTTTTGCAGATAGAATTATGGAAGTTATTAACCCTGAAGATGATTATGTGTGGATACATGATTATCATCTGATGGTGTTGCCAACTTTCTTGAGGAAGAGGTTCAACAGGGTGAAGTTGGGGTTCTTCCTTCACAGCCCATTCCCTTCATCAGAGATATATAAAACATTGCCTGTTAGGGAGGAGATCTTGAGAGCCCTCCTTAATTCAGATTTGATCGGCTTCCACACTTTTGATTATGCGCGCCATTTCCTCTCCTGTTGTAGCAGGATGCTCGGCCTTACCTACGAATCAAAGCGTGGTTATATTGGGATTGAGTACTATGGTAGGACTGTTAGTATCAAAATTCTCCCTGTTGGTATTCACATGGGTCAGCTTCAATCTGTTTTGAGGATGCCTCAGACTGAAGAAAAAGTTTGTGAGCTCATTAAACAGTTTTCTGATAAAGGAAGGACATTGTTGCTTGGGGTGGATGACATGGATATTTTCAAGGGAATAAGTCTGAAGCTATTGGCCATGGAGCAACTTCTCATTCAGCACCCTGAGTATCGGGAAAAGGTAGTGCTAGTTCAGATAGCTAATCCTGCCAGGGGTCGGGGGAAGGATGTGAAAGAAGTGCAAGCTGAGACAAAGGCCACGGTGAAACGGATTAATGAAACATTTGGGAAATCCGGGTATGATCCTGTCATTCTGATCGAGGAGCCTCTCAAGTTTTATGAGAGAGTTGCTTACTATGTTGTTGCAGAGTGTTGTTTAGTCACCGCAGTTAGGGATGGAATGAATCTCATACCGTATGAATATATCATCAGTCGACAAGGAAATGAAATGTTGGATAAAGTTTTGGGTCTAGCTTCTTCTCCTAAGAAAAAAAGCATGTTAGTTGTGTCTGAATTCATTGGCTGTTCCCCATCTTTAAGTGGAGCAATCAGAGTGAACCCGTGGAATATTGATGCCGTAGCCGATGCAATGGACTCTGCACTGGAAATGGCTGATTCAGAGAAAGAGCTTAGGCATGAAAAACATTATAGATATGTTAGTACTCATGATGTTGGGTACTGGGCTCGAAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGTGATCACGTGCGGCGAAGGTGGTGGGGGATTGGATTTGGATTAAGCTTCAGAGTTGTTGCACTTGATCCTAACTTCAAGAAGCTCTCAATGGAGCACATAGTTTCAGCATACAAGCGGACAACAACTAGGGCAATCCTTCTTGACTATGATGGTACACTAATGCCTCAATCATCCACAATTGATAAGAGTCCAAGCAGTAAATCCATTGAAATTCTTAGTAGTTTGTGTAGAGATAAGAACAACATAGTTTTCCTTGTTAGTGCTAGAAGCCGGAAGATGCTTTCTGAATGGTTTTCTCCTTGTGAGAACCTGGGAGTTGCAGCTGAGCATGGTTACTTTCAAAGAATGAAGCGAGATGAAGAGTGGGAAACGCATGTTGCCGCAACAGACTGTAGTTGGAAGCAAATTGCAGAACCTGTAATGAAACTTTATACTGAAACGACCGATGGATCCACCATTGAAGACAAGGAGACTGCACTTGTTTGGTGCTATGAGGATGCAGATCCAGACTTTGGATCATGCCAAGCTAAGGAACTTCTTGATCACCTTGAGAGTGTGCTTGCAAATGAACCAGTAACAGTCAAGAGTGGCCAGAACAATGTAGAGGTTAAACCACAGGGTGTGAACAAGGGACTAGTGGCCAAACGCCTACTTTCTGCCATGCAAGAAAAGGGAATGTACCCTGATTTTGTTTTGTGCATAGGAGATGACAGTTCTGATGAAGACATGTTTGAGGTGATCACCAGCTCAATGGGCGGGCCAATCGCCCCACGGGCCGAAGTATTCGCCTGCACCGTTTGTCGAAAACCCAGTAAGGCTAAGTACTATCTGGATGATACAACTGAAATAGTGAGATTGCTCCAGGGCTTAGCCTGTGTTTCAGAGCAAATAGTTTGTTAA 2562 0.4379 MVSKSYSNLLELASGEAPSFGYMNRRIPRIMTVAGLISDVDDDPVDSVCSDPSSSSAHRDRIIMVANQLPIRAQRRPDGNRSCWSFEWDENALLQLKDGLGDDDIEVIYVGCLKEEVHPSEQDEVSQTLLETFKCVPTFLPADQFTKYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPVREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLRMPQTEEKVCELIKQFSDKGRTLLLGVDDMDIFKGISLKLLAMEQLLIQHPEYREKVVLVQIANPARGRGKDVKEVQAETKATVKRINETFGKSGYDPVILIEEPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEMLDKVLGLASSPKKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKELRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQSSTIDKSPSSKSIEILSSLCRDKNNIVFLVSARSRKMLSEWFSPCENLGVAAEHGYFQRMKRDEEWETHVAATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNNVEVKPQGVNKGLVAKRLLSAMQEKGMYPDFVLCIGDDSSDEDMFEVITSSMGGPIAPRAEVFACTVCRKPSKAKYYLDDTTEIVRLLQGLACVSEQIVC 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02083 853 NCBIfam trehalose-phosphatase 596 844 IPR003337 GO:0003824|GO:0005992
Spst2g02083 853 SUPERFAMILY HAD-like 597 845 IPR036412 -
Spst2g02083 853 Gene3D Glycogen Phosphorylase B; 53 315 - -
Spst2g02083 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 596 714 - -
Spst2g02083 853 FunFam Alpha,alpha-trehalose-phosphate synthase 317 534 - -
Spst2g02083 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 553 - -
Spst2g02083 853 Pfam Trehalose-phosphatase 600 834 IPR003337 GO:0003824|GO:0005992
Spst2g02083 853 Gene3D - 596 729 IPR023214 -
Spst2g02083 853 Gene3D - 730 852 IPR023214 -
Spst2g02083 853 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 727 852 - -
Spst2g02083 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 315 - -
Spst2g02083 853 CDD HAD_TPP 598 839 - -
Spst2g02083 853 NCBIfam HAD-IIB family hydrolase 599 801 IPR006379 -
Spst2g02083 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 845 IPR001830 GO:0003824|GO:0005992
Spst2g02083 853 CDD GT20_TPS 61 550 IPR001830 GO:0003824|GO:0005992
Spst2g02083 853 Gene3D Glycogen Phosphorylase B; 316 534 - -
Spst2g02083 853 Pfam Glycosyltransferase family 20 61 550 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02083 Spst-Chr2 19993918 19997154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02083 1 852 Trehalose Biosynthesis Gene Families AT1G68020 80.485 0.0 1445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02083 2 19993918 19997154 Spst2g02083 2 19993918 19997154 ECH