Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02080 ATGATACCTTCTCTCTTCAATACTGGCAACTGGAGATTGATGAAAGTTGTTGACGGTGTTTTCATGATTAGGAAGGTTGTAGGTAAGGCAATTGAGTTGGCATTGAGGATGGGTAAAACAATTGAGTTGTATGGATTTCCTATTTCTGTGACAGTGTCTGATGTAAGGAATTTTGTAGAGACTTATACTGGTGAAGGAACTGTCTCAATAATCAAGCTAAGACATGGCAAAGGTCGGGTTCCAAGGGCATACGCTATTATTCAATTCACCACAGAAGATCGTGCTAAATATATGATCTCCAAGGCTAAAAGCATTTTGGGACCACTGCGCTATAGAAGTGCCTATTTAAAAGCTCGGGAAATGGAAAGAGATATTGATCCAAAGCTGGTTTTGCATGATTTGGAAAGTGTGAACCTGTATTTTGGCTGCCAGATTTCGAAAGGAGAATTTTCTGTTTTGTGGAAAAAGCTGGATGTTACTCTAACTTTTGGGACTGGAAAGAGAAAGGTGCAGTTGACATTTTCCCATAACAACGTGCGATATAAACTTGAGCTTTCATATGAGAACATTTGGAAGGTTGAGCTGCTTCAACCACGGGATAAAACTGCACGTTATCTCCTTATTCAGTTACTTGGTGCTCCCCGGATATTTGAGAATGATGTACCTACATCAGCAGATATATATGATAATCCTGCGTTCAACTTCTACCAAGTTGTTCCTGATGACCATTGGATCAGAACAATAGATTTCACTCCGCATAATTGCATTGGGCAGTCCTCCGCCATATGTCTGGAGTTTCCAAGTGGCCAAAATTTACCAAATTTCAAGGATAACTTTGCTTATTATGAGCAAAGTAAGAGGCAATACACATTACAGTCAGGAGTTCCGTTTTCTCAAAATTGGGGTCTTGTCCCCATTGTTGCTCCTGGAGGTGTTGAAATACCCTTTGACATCTTGTTTAAAGTCAATTCATTGGTTCAGCACGTGTGTCTTGCAGGACCTGTACTTGATGATGAGTTCTATCGCTTTGTTGATCCATCCAGAATGCCCCTTAATTTTATTGAAAATGCTTTAGAAAAACTGTACTATTCAAAGGAATTCTGTTATGAACCCAAAAAGTGGCTGTTTGATCAGTACAAAAGGTACCTTCAATCGAAGAATCATCCTCGGCCTCCTGCAATATCTTTGGATACAGGGTTGGTATATGTTCGCAGGGTTCAGATCACCCCATGCAAAGTTTACTTTTGTGGTCCAGAGATTAATGTCTCAAATCGTGTTCTCCGTCATTTCCACAAACATATAGATAACTTCTTACGGGTTTCATTTGTTGATGAGGAGTTGGATAGACTGTTTTCAACGGATTTATCATCACGAGCACAGAACAAGAAAACTGAGATATACACCAGAATTCTTTCCATCCTTCAAAATGGCATTGTTATTGGTGGTAAGAAGTTTGAATTTCTTGCATTCTCATCAAGTCAGTTGCGGGAAAACTCTCTCTGGATGTTTGCTCCTACAGGAACTGGATGCACCGCTGCTTCCATAAGGGGATGGATGGGAAATTTTAGCCAGATTAGGAATGTTGCTAAATATGCTGCTAGGCTGGGACAATCTTTTGGTTCATCTACTGAAACTCTAAGCGTCCATAGGGATGAAATTGAAATTATAAGTGATGTGAAGAAGTTTACTTATGATGGAAAGGAATATGTTTTCTCTGATGGTATTGGGAAAATATCTCTTGGATTTGCCAAGCGTGTGGCTAAAAAATGTGGCTATGATTGCACTCCATCTGCTTTTCAGATTCGATATGGTGGTTACAAAGGAGTTGTAGCTGTTGATCCAGCATCACGTTATAAGTTATCACTGAGGAGGAGCATGCGGAAGTATGAGTCAGATAACATGAAGTTAGACGTTTTAGCTTGTAGTAAATTTCAGCCATGTTATCTGAATCGGCAGTTAATTACCCTCTTATCCACTCTTGGTATCAAGGATGGTGTTTTTCAGAAAAAACAAAAAGAAGCTGTGGATCAACTGGACACTATGCTAACAGATTCATTGAAAGCACAGGAAGTTCTGGACTTAATGTCTGCTGGGGAGATCACTAATGTTCTGAAGGAGATGCTCATTTGTGGCTACAAGCCTAATAATGAACCATTCCTTTCAATGATGCTGAAAACATTTAGGGCATCAAAACTGTTGGAATTGCGTCTGAAATCCAGGATCATTATTCCAAAAGGAAGAGCAATGATGGGTTGTCTAGATGAAACTAAAAACCTGGAATATGGTCAAGTATTTGTGCAGTTTTCTAACAGTAGGCTGCGGGATTCTGATGATTCTTTTTCTTATAATTTGCCAAAGAATTATATGGTTACAGGTAAGGTAGTAGTAGCTAAAAACCCTTGCTTGCACCCAGGTGATGTGCGTATTTTACAGGCTGTGGATGTGCCAGATTTGTACCACATGGTGGACTGTGTTGTTTTCCCTCAAAAAGGACCAAGACCTCACCCAAATGAATGTTCGGGAAGTGATCTAGATGGAGATATCTACTTTGTTTGTTGGGACCCTGAATTGATTCCCTCTCACCAAATCGAACCGATGGACTACACTCCTGCCCCAACTACAGAACTGGATCATGATGTGAGAATTGAGGAAGTTGAGGAGTATTTTACCAATTACATTGTCAATGACAGTCTGGGAATAATTGCCAATGCACACACTGTATTTGCTGATAAAGAAGCAGCGAAAGCAATGTCTGGTCCATGTATTGAGCTTGCAAAGCTGTTCTCAACGGCAGTTGACTTTCCAAAAACTGGTGTTCCAGCTGTTATTCCTCCGCATCTTTATGTCAAAGAATATCCTGACTTCATGGAGAAGCCTGACAAGCTTACCTATGTATCACGTAATGTAATAGGAAAGCTCTTTAGGGAAGTGCAAGAAATTTCATCAAGTGCTGGGGGCTCTATTACATCCTTCACTCGTGATGTTGCGGTAAACTCTTACGACCCTGACATGGAATTTGATGGCTTTGAGGATTATGTTGATGATGCTTGCTATCATAAATCCAACTATGACTACAAGTTGGGAAATCTGATGGACTACTATGGGATCAAAACTGAAGCTGAAATCCTCAGTGGTAATATCATGAAAATGTCAAAATCTTTCAACAAAAGGAGGGATTCAGAAGCAATCAATATGGCTGTGAGGTCCCTAAGGAAAGAGGCCCGGTCCTGGTTCAATGAGGGAAGCAGTGGTGTAGATTTTGAGAATAGTGATGATAAATATGCAAAAGCTTCTGCTTGGTACCATGTTACTTATCATCCAAGTTACTGGGGTTGCTACAATGAAGGCATGATCAGGGATCATTTTCTAAGTTTCCCATGGTGTGTATACCCTCAGCTTGTTCAAATCAAGAAGGAGAAAGTCTCGAACAGAATGTACTCTAGGGAATTCAGTTTAAGTGGGTTGCGTTTGAATTGA 3477 0.4021 MIPSLFNTGNWRLMKVVDGVFMIRKVVGKAIELALRMGKTIELYGFPISVTVSDVRNFVETYTGEGTVSIIKLRHGKGRVPRAYAIIQFTTEDRAKYMISKAKSILGPLRYRSAYLKAREMERDIDPKLVLHDLESVNLYFGCQISKGEFSVLWKKLDVTLTFGTGKRKVQLTFSHNNVRYKLELSYENIWKVELLQPRDKTARYLLIQLLGAPRIFENDVPTSADIYDNPAFNFYQVVPDDHWIRTIDFTPHNCIGQSSAICLEFPSGQNLPNFKDNFAYYEQSKRQYTLQSGVPFSQNWGLVPIVAPGGVEIPFDILFKVNSLVQHVCLAGPVLDDEFYRFVDPSRMPLNFIENALEKLYYSKEFCYEPKKWLFDQYKRYLQSKNHPRPPAISLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHKHIDNFLRVSFVDEELDRLFSTDLSSRAQNKKTEIYTRILSILQNGIVIGGKKFEFLAFSSSQLRENSLWMFAPTGTGCTAASIRGWMGNFSQIRNVAKYAARLGQSFGSSTETLSVHRDEIEIISDVKKFTYDGKEYVFSDGIGKISLGFAKRVAKKCGYDCTPSAFQIRYGGYKGVVAVDPASRYKLSLRRSMRKYESDNMKLDVLACSKFQPCYLNRQLITLLSTLGIKDGVFQKKQKEAVDQLDTMLTDSLKAQEVLDLMSAGEITNVLKEMLICGYKPNNEPFLSMMLKTFRASKLLELRLKSRIIIPKGRAMMGCLDETKNLEYGQVFVQFSNSRLRDSDDSFSYNLPKNYMVTGKVVVAKNPCLHPGDVRILQAVDVPDLYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSHQIEPMDYTPAPTTELDHDVRIEEVEEYFTNYIVNDSLGIIANAHTVFADKEAAKAMSGPCIELAKLFSTAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKLTYVSRNVIGKLFREVQEISSSAGGSITSFTRDVAVNSYDPDMEFDGFEDYVDDACYHKSNYDYKLGNLMDYYGIKTEAEILSGNIMKMSKSFNKRRDSEAINMAVRSLRKEARSWFNEGSSGVDFENSDDKYAKASAWYHVTYHPSYWGCYNEGMIRDHFLSFPWCVYPQLVQIKKEKVSNRMYSREFSLSGLRLN 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02080 1158 PANTHER RNA-DEPENDENT RNA POLYMERASE 37 1141 IPR007855 GO:0003968
Spst2g02080 1158 Pfam RNA dependent RNA polymerase 408 977 IPR007855 GO:0003968
Spst2g02080 1158 Gene3D - 36 125 IPR012677 -
Spst2g02080 1158 SUPERFAMILY RNA-binding domain, RBD 36 107 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02080 Spst-Chr2 19975971 19983740 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02080 2 19975971 19983740 Spst2g02080 2 19975971 19983740 ECH