Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02078 ATGTGCAAGACAATTCAAATGCATGGATTCCCAGATACAGTGTCAGCTGAAGAGGTGAGGAAATTTTTGGAACAATATACAGGCCCTCAAACTGTTCATGTTGTAGAGGTTAAGCAGCACAAAGAAAAAGATTCTACCACACATGTTAATGTTCAATTCACAGACAAAAAAAGCGTTGAAACAATTTTGCACTTACTTACTCAGCACCTATCATACGGTGACAGTGTTCTCAATGCTACAGAAATAAAACAGGACATTTTGCCAAAGCCAAGGAACTTTCCTCACAGCATGGATGACATAGCAGTGTACTTTGGATGTCAAACATCCAAGGACAAACTTAGTGTACTCTGGGAGCATCCAAGTGCTTCAGTCAAATTCGGGTCCAGACTGAGAAAGATGTATATATTTTTCCATTATTTGTCTGTGGATTATAAGCTGCAGATTTCTTCTGAGAGTATATCACGTATTGAGCTGCATCATTCAGATGATTTGACCAAAAAGCTTCTCCTTTTCCAGTTACGCAATGCTCCCCTGATCTATGAGAAGGATGTTTCCAAAAGCAAATATTTAAAGGAGGCTTGTGACAACCATTGGTTTCGAGGAGTAGATTTCACCCCATCATGTAGCATTGGACAATCTTCTGTTTTATCTTTTGAGCTTCCAAATAGTTTGGAAGTTCCAAAGTTCAATCAGCACTATCGTAATTATAATGAAGTTGATGACAGTGTCTTTACTCTTGAGAGACACCTTGGTTTCTCTTCTAAATTCAATTTTGTCCCCATAGTGAACCCTCCAGAAGGCATCAACTTGCCATACAAAGTTTTGTTCAAAATCAACTCATTAATTCAGCATGGATGTCTTCCTGTGCTAGCAGTTGACGTCGATCTTTTTCAACTAGTTGACCCTGGAAGAGTGAAGCTTGAATATATAGAAAGTGCCCTGCATAAATTAGATCAAATAAAAGTATGCTGCTATGAACCTGCACAATGGTTGGAGAAACAATATAAGAAATACTCAGAAAATAATCTACTTCCAGTATCTAGTGCTATTTCATTGGATGATGGTTTGGTCTATGTGCATAGAGTAAAAGTAACTCCATCCAAAATATACTTCTGTGGTCCTGAAGTGAACCTTTCTAATCGTGTCTTGCGCAAGTATCCTGATGACACTGATAACTTTCTACGTGTTTCTTTCGTTGATGAAGACATGGACAAACTTCATTCAGCAGCTTTAGTGCCACGTTCATCTTCTGTAGACATGGACACAGAAACAAAGCTCCATGAGAGGGTACTGTCAACACTTAAAAATGGTATAGAAATTGGTGATAAGAAGTTTGAGTTTCTTGCCTTCTCACCAAGTCAATTGCGGGATAACTCTGTGTGGATGGTTGCACCAAGAACTGGACTTGCTGCATCTGATATAAGAAAATGGATGGGAGAGTTTCATGATATTAAAAATGTGGCCAAATATGCAGCAAGGCTGGGTCAATCATTCGGATCTTCCAGGGAAACAGTGAGTGTTGGCAGACATGAAATTAAAATTATTCCTGATATAGAATTAAGAAGAGGTGAAACCAAATACTGTTTCTCTGATGGAATTGGGAAGATATCTTATGAATTGGCTCAAGAAGTGGCTAAGAAATGTGGTTGTAGGGATCATACTCCATCTGCATTTCAAATCAGATATGGGGGGTACAAAGGTGTTGTTGCTGTTGATCCTACCTCATCAACTAAGCTGTCCTTAAGAAAGAGCATGTGCAAGTACAAGTCAGAATACGCAAAATTAGATGTTTTGGCATGGAGCAAATACAAACCATGTTACCTTAATCGTCAGATAATCACCCTCTTGTCCACGCTTGGTGTTAAGGATGGAGTCTTCAGAAAGAAACAACGAGAGGTCCTTAATCAACTAAAAATGATATCAAGAAAGCCGTTGATGATATTAGATTATATGTCCACAGGAGAGATTGCAAACATTTTAAAGGAAATGCTTATTTGTGGCTTTCATCCAACTAAGGAACCATTTCTTTCCATGATGTTGCAAACATTATATGCATCAAAGTTACAGGAATTGCAGCTCAAAACTAGGATACTTGTTAGGAAAGGAAGAGCATTGTTGGGATGCTTAGATGAAACTAGGACACTAAAATATGGAGAGGTATTTGTGCAGATAGCTCACCAAAGAAATAAGCAATTTCTTGCTATGTCCTCTGTTTCTTCGAACAGATATGGATTAAACAAAAGCAAACATATTGTTAAGGGAAAGGTAGTTGTAGCCAAAAATCCCTGTCTGCACCCGGGAGATGTGCGAGTTTTAAGAGCAGTGGATGTACCTTCTCTGCATCATATGGTGGACTGTGTTGTTTTTCCACAGAAAGGGAGAAGACCACATCCCAATGAATGTTCTGGAAGTGACTTGGATGGAGATATCTACTTTGTCAGTTGGGACCCTGATCTTATTCCTCCTCGTCAGGAAAATCCCATGGATCATGCACCATCTCCAGTTGTGAATCTGGATCATGATGTTACATTACAGGAAGTTCAGGAGTATTTTGCTCAGTACATGGTTAAAGACAGGTTGGGAATTGTTGCAAGTGCACACATGGTGTTTGCTGATAAAGATCCTCAAAAGGCTATGAGCCCTGCATGTATTGAGCTTGCAAAGCTACATTCAGTTGCTGTTGATTTTGCGAAGTCTGGTGTGGCAGCAGAAATTCCACAACATCTACGCGTGGAAGAGTATCCAGATTTCATGGAAAAGCCAGACAAACCAAGTTACCAATCAAATACCATAATAGGAAAGCTTTATCGTGAGGTGAAGAATGTTGCACAACACAAGAGTCTCACCAAACCCTTCACTAGAAGAGTGGCAAGGCAATCATATGACCGTGACATGGAGATTGATGGCTTTGAGAATTATACAGATAGTGCTAGTGAATACAAGAACATGTATGACTTCAAGTTGGGGAACCTAATGGATTACTATGGTATTGAGACAGAAGCAGAAATAATCAGTGGCAATGTCTTGAAAATGTCAAAATCCTTCAATGAAAGAAAGGACTTGGAAGGAATTAACAATGCTGTGATGTCTCTAAGAAAGGAAGCTAGAAGCTGGTTCAATGCGATGATAAAAAACAAGTCAAATTCTGAAGCTGATGATGATGCTTATGCAATAGCATCAGCTTGGTACCATGTTACATATCATCCAAGGTATTGGGGAACCTACAATCAAGGGCTTAACAGGGATCATTTCCTCAGCTTCCCATGGTGTGTGCATGACACTCTCATCCAGATAAAGAAAGACAAAGTCAGACATAGAACTTTTACAATGAAGCTTTGGACCATACTGAAACTGATTCCCCTGTTACTGTTTTTCTTCCTATCGTGGATAATAGTACAATATGTAAATAGTTGA 3414 0.3916 MCKTIQMHGFPDTVSAEEVRKFLEQYTGPQTVHVVEVKQHKEKDSTTHVNVQFTDKKSVETILHLLTQHLSYGDSVLNATEIKQDILPKPRNFPHSMDDIAVYFGCQTSKDKLSVLWEHPSASVKFGSRLRKMYIFFHYLSVDYKLQISSESISRIELHHSDDLTKKLLLFQLRNAPLIYEKDVSKSKYLKEACDNHWFRGVDFTPSCSIGQSSVLSFELPNSLEVPKFNQHYRNYNEVDDSVFTLERHLGFSSKFNFVPIVNPPEGINLPYKVLFKINSLIQHGCLPVLAVDVDLFQLVDPGRVKLEYIESALHKLDQIKVCCYEPAQWLEKQYKKYSENNLLPVSSAISLDDGLVYVHRVKVTPSKIYFCGPEVNLSNRVLRKYPDDTDNFLRVSFVDEDMDKLHSAALVPRSSSVDMDTETKLHERVLSTLKNGIEIGDKKFEFLAFSPSQLRDNSVWMVAPRTGLAASDIRKWMGEFHDIKNVAKYAARLGQSFGSSRETVSVGRHEIKIIPDIELRRGETKYCFSDGIGKISYELAQEVAKKCGCRDHTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMCKYKSEYAKLDVLAWSKYKPCYLNRQIITLLSTLGVKDGVFRKKQREVLNQLKMISRKPLMILDYMSTGEIANILKEMLICGFHPTKEPFLSMMLQTLYASKLQELQLKTRILVRKGRALLGCLDETRTLKYGEVFVQIAHQRNKQFLAMSSVSSNRYGLNKSKHIVKGKVVVAKNPCLHPGDVRVLRAVDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVSWDPDLIPPRQENPMDHAPSPVVNLDHDVTLQEVQEYFAQYMVKDRLGIVASAHMVFADKDPQKAMSPACIELAKLHSVAVDFAKSGVAAEIPQHLRVEEYPDFMEKPDKPSYQSNTIIGKLYREVKNVAQHKSLTKPFTRRVARQSYDRDMEIDGFENYTDSASEYKNMYDFKLGNLMDYYGIETEAEIISGNVLKMSKSFNERKDLEGINNAVMSLRKEARSWFNAMIKNKSNSEADDDAYAIASAWYHVTYHPRYWGTYNQGLNRDHFLSFPWCVHDTLIQIKKDKVRHRTFTMKLWTILKLIPLLLFFFLSWIIVQYVNS 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02078 1137 Pfam RNA dependent RNA polymerase 364 939 IPR007855 GO:0003968
Spst2g02078 1137 PANTHER RNA-DEPENDENT RNA POLYMERASE 3 1106 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02078 Spst-Chr2 19965039 19970098 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02078 2 19965039 19970098 Spst2g02078 2 19965039 19970098 ECH