Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02070 ATGAATAAACAAAAACAGGCTTATCGTGAGCTTGAAGCGTCGTGCGCACCCCCTGGTAGCGACGTGGGGCTTCATCTTTTGGGTGGTAGTGCGCGCTGCAGCGTAGGACTCAGAGCCACAGCATCCATGGCGATTGAAACGCTAGTGTTAGGCGCTGGCCAAGAAGTTGGGAAGAGCTGCGTGGTGGTAACCATCAACGGCAAGCGAATCATGTTCGATTGCGGAATGCACATGGGCTTCTTGGACCATCGTCGTTACCCTGACTTCACCCTCATCGACCCCAATCAAGATTTCAACTCCGCCATTACTTGCATCATCATCACTCACTTTCATTTGGATCATGTTGGCGCTTTAGCTTACTTCACTGAAGTTTGCGGTTATAATGGACCGATTTACATGACGCAGTACCCAACAAAAGCTTTGGCTCCTTTGATGTTGGAAGACTACCGGAAAGTGATGGTTGATCGCCGGGGGGAGGAAGAGCTATTCTCTGTTGATCAAATTGCTGAGTGCATGAAGAAAGTTACTGCTGTTGACCTGAGGCAGACTGTAAAAGTAGATGAAGATCTGCAGATACGAGCCTATTACGCAGGACATGTTATTGGAGCTGCAATGTTCTATGCAAAAGTGGGAGATGCAGAAATGGTTTATACTGGAGACTACAATATGACAGCAGATAGACATCTTGGAGCAGCTCAAATTGATCGACTGCGACTTGACCTTCTTATAACCGAATCCACATATGCGACTACAATACGTGATTCAAGATATTCTCGTGAGAGGGAATTCCTCAAAGCTGTGCATTTGATTGGAATAGAATATTTAGAGTCAGCTGGTCTAGGAATATTTGTTTATAAGGTTCATAAATGTGTATCTTGTGGAGGCAAGGTGCTTATTCCAACATTTGCTCTTGGAAGAGCTCAGGAACTATGCATTTTATTGGAAGACTACTGGGAACGCATGAATTTGAAGGTTCCTATCTACTTCTCAGCAGGTTTAACAATCCAAGCTAATGCGTATTATAAGATGCTTATTAGTTGGACAAGCCAGAAGATTAAAGATACATACTCTAAACATAATGCTTTTGATTTTAAGAATGCTCCTCATTCATCTAGTTTGGATGTTACAGTTCAAAAATTTGAAAGGTCTATGATTGATGCTCCTGGCCCTTGTGTTCTTTTCGCCACTCCTGGGATGATAAGTGGTGGATTTTCACTTGAAGTTTTTAAGCACTGGGCAGTGTCAGAAAACAACCTTGTCACTTTGCCTGGGTATTGTGTGGCTGGAACGATAGGTCATAAATTAATGTCAGATAAGCAGGCCAAAGTTGATCTGGATGCTAATACAAAATTAGATGTTCGATGCCAGGTTCATCAATTAGCTTTTAGTCCTCACACTGATTCTAAAGGGATAATGGATCTTGTAAATTTTCTCACCCCCAAGCATGTGATACTAGTGCATGGGGAGAAGCATAAGATGGCTTCCCTTAAGGAAAAAATTCATTCTGAATTGGGGATTCAATGTTATGATCCTGCAAACAATGAAACCATATCCATCTCTTCAACTCACTATGTAAATGCAGAAACCTCAGATACTTTCGATCGAAGCTGCTTGAGTCCGAACTTCACGTTTCCGAAATGCAGTTCGGTGGACACATGTAACTCTACTATAATGGACAAAAACTTAATGCCTATGATTCAAGTTGAAGATGAAAGGGTATCAGAAGGAGTTTTGGTTGTGGAGAAGGGAAAAAAGGCAAAGATTGTTCACCAGGATGAACTTTTGCTTATGTTGGGGGAACAGAAGCACCAGCACGATACAATGAGCTGGACGTTGTGA 1839 0.4252 MNKQKQAYRELEASCAPPGSDVGLHLLGGSARCSVGLRATASMAIETLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGFLDHRRYPDFTLIDPNQDFNSAITCIIITHFHLDHVGALAYFTEVCGYNGPIYMTQYPTKALAPLMLEDYRKVMVDRRGEEELFSVDQIAECMKKVTAVDLRQTVKVDEDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMTADRHLGAAQIDRLRLDLLITESTYATTIRDSRYSREREFLKAVHLIGIEYLESAGLGIFVYKVHKCVSCGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTIQANAYYKMLISWTSQKIKDTYSKHNAFDFKNAPHSSSLDVTVQKFERSMIDAPGPCVLFATPGMISGGFSLEVFKHWAVSENNLVTLPGYCVAGTIGHKLMSDKQAKVDLDANTKLDVRCQVHQLAFSPHTDSKGIMDLVNFLTPKHVILVHGEKHKMASLKEKIHSELGIQCYDPANNETISISSTHYVNAETSDTFDRSCLSPNFTFPKCSSVDTCNSTIMDKNLMPMIQVEDERVSEGVLVVEKGKKAKIVHQDELLLMLGEQKHQHDTMSWTL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02070 612 SUPERFAMILY Metallo-hydrolase/oxidoreductase 47 520 IPR036866 -
Spst2g02070 612 SMART Lactamase_B_5a 57 267 IPR001279 -
Spst2g02070 612 FunFam Integrator complex subunit 11 isoform X3 50 274 - -
Spst2g02070 612 FunFam Cleavage and polyadenylation specificity factor subunit 3-II 281 465 - -
Spst2g02070 612 Gene3D - 282 462 - -
Spst2g02070 612 SMART Beta_Casp_2 307 435 IPR022712 -
Spst2g02070 612 CDD INTS11-like_MBL-fold 48 246 IPR041897 -
Spst2g02070 612 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 451 509 IPR011108 -
Spst2g02070 612 Pfam Beta-Casp domain 307 435 IPR022712 -
Spst2g02070 612 Gene3D - 39 276 IPR036866 -
Spst2g02070 612 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 283 604 - -
Spst2g02070 612 Pfam Metallo-beta-lactamase superfamily domain 63 234 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02070 Spst-Chr2 19891247 19901620 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02070 2 19891247 19901620 Spst2g02070 2 19891247 19901620 ECH