Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02066 ATGTATGCTTCCAACGCTCTCAGATCATCAAAACTGGTGTCATGGAAACCGATGGGGAGGCTTCAGCAAACCCTAGCGGGATGCGTGGAGCGGAGCGGCGTGGGTCTTCATTCGGGAAAAGTTTCGACGGTGAGGCTGTGGCCCGAGCTCTCCTCCCGAGGCAGGTACTTTGATTTTCGCTCCCGTTCAATCCCCGCCTCCGTCGAGTATGCTCAGGTGTCGCCGCTCTGCACCACTCTGTGCATGGGCGGATTCCGAATTCGAACCGTGGAGCACTTGCTTTCGGCTTTGGAGGCTTTTGGAGTTGATAATTGCAGGATTGAGATTGAAGATTTTGGTGATAAAGAGAACGACGCAGAGATTCCTATATTGGATGGGTCAGCAAGGGAATGGGTGGCAGCAGTGGAAGGAGTTGGTTTAATGGTGGCCACTGATCTTGATGGCAAAAGTGTTGAGAAAATGGCACCACATGTGAATGAACCGGTGTGTGCTTGGAGAAATGATTCTTTTGTTGCTGCATTTCCTTCAGAAATGGTTCAAATAACTTATGGCATCAACTTTCCACAGGCACCTGCTATTGGCTGCCAGTGGTTTTCTACCTACCCCTTGGATAATTTGGTTTATTCCATGCAGATAGCTTTGTCAAGAACCTTCTGCATTTACGAGGAGATTGAGCATATGCGCAATGCTGGACTTATCAAAGGAGGTTCTATAGAAAATGCCATTGTATGCAGTGCTAGTAAGGGTTGGTTGAATCCACCTCTGCATTTCAGTGATGAACCATGCCGTCACAAGATCTTGGACCTTATCGGTGATCTCTCGCTGGTTGCTCACTCTGGGAATCAAGGACTCCCAGTGGCACACATCGTAGCATACAAGGGTGGTCATGCATTGCATGCCGATTTGGCGCGCCGCCTTGTAGGTGTTGACAATGTTTACTGA 942 0.4904 MYASNALRSSKLVSWKPMGRLQQTLAGCVERSGVGLHSGKVSTVRLWPELSSRGRYFDFRSRSIPASVEYAQVSPLCTTLCMGGFRIRTVEHLLSALEAFGVDNCRIEIEDFGDKENDAEIPILDGSAREWVAAVEGVGLMVATDLDGKSVEKMAPHVNEPVCAWRNDSFVAAFPSEMVQITYGINFPQAPAIGCQWFSTYPLDNLVYSMQIALSRTFCIYEEIEHMRNAGLIKGGSIENAIVCSASKGWLNPPLHFSDEPCRHKILDLIGDLSLVAHSGNQGLPVAHIVAYKGGHALHADLARRLVGVDNVY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02066 313 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 22 307 IPR004463 GO:0008759|GO:0009245
Spst2g02066 313 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 22 307 IPR004463 GO:0008759|GO:0009245
Spst2g02066 313 SUPERFAMILY Ribosomal protein S5 domain 2-like 160 307 IPR020568 -
Spst2g02066 313 Hamap UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 20 311 IPR004463 GO:0008759|GO:0009245
Spst2g02066 313 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 3 308 IPR004463 GO:0008759|GO:0009245
Spst2g02066 313 Gene3D lpxc deacetylase, domain 1 20 145 IPR015870 GO:0008759|GO:0009245
Spst2g02066 313 SUPERFAMILY Ribosomal protein S5 domain 2-like 21 141 IPR020568 -
Spst2g02066 313 Gene3D lpxc deacetylase, domain 2 157 312 IPR011334 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02066 2 307 Carbohydrate Esterase AT1G25054 65.686 7.55e-146 412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02066 2 19839764 19845063 Spst2g02066 2 19839764 19845063 ECH