Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02063 ATGTTGGTTACCTCCTTCTTCTTTCACCCACCACTTTCATTTCACTCTCACCAACTGTTCGCCTCCATTTGCATCTCATTCTTCTCAGGTGCTGGTGCAGGAGAGGATATTATGGACTCAAAGGCCATGACCTTCATAACCCACCAAGCCGTTTTCAACGCGGTTCGATGTGGGGACCTTGAAGGGCTCAAGGAGCAGCTGAAGAATTACAAGGGGGAGGCCTCACCAGAGGGGATGCTTTCTGAGGTGATGTCTATGCAGAACGATACAGGGGAAACTTTGCTGTATATAGCTGCTGAGATTGGTCATCCTGAGGTGTTCAGCTTCTTGCTTGGTTTGTGTGACTTGGAGGTGCTGAAGATCAGGGCAAACTCTGATATGAACGCCTTTCACGTTGCAGCCAAACGTGGCCATTTGGATATCGTAAAGGAAATTTTGAGTATTTGGCCTGAGGTTTGTAAGATATGTGACTCCTCCAGCACTAGTCCCCTATATTTCGCTGCTGTTCAAGATCATTTGGATGTAGTGAATGCAATATTGGATGTTGATGTGAGTTCAATGATGATTGTAAGAAAAAATGGCAAAACTGCATTGCATAATGCTGCTAGGTATGGCATCCTTCGCATTGTAAAAGCACTGATTGCCCGTGATACTGGAATAGTCTGCATCAAAGATAAAAAGGGTCAAACTGCACTTCATATGGCTGTGAAAGGACAAAGTACTTCGGTGGTGGAGGAGATATTACAAGCTGACCTTACGATAATGAATGAGCGAGATAAGAAGGGAAACACGGCTCTTCACATGGCTACCAGGAAAGCCCGTTCACAGATAGTGAGCCTTCTGTTAATCTACACAGCTATAAATGTTAATGCCATCAATAATCAGAAAGAAACTGCCTTGGATTTGGCAGATAAACTGCCATATGGACATCCAGCTTTGGAAATCAAGGAGGCCCTTGCGGAATGTGGTGCCAAGCATGCCAGGCATATTGGGAAAGTGGATGAAGCCATGGAACTAAAAAGAGCTGTTAGTGATATAAAACATGAGGTGCAATCACAGCTTATACAGAATGAAAAGACTCGCAGACGAGTTTCAGGTATTGCCAAGGAATTGAAGAAAATTCATAGAGAGGCAGTGCAGAACACCATTAATTCTGTCACAGTAGTAGCTGTCCTTTTTGGCTCAATAGCATTCATGGCCTTATTCAGTTTACCTGGTCAATATCGAAAGAAGCAACCGGAGGCAGGCGAGGCAAATATAGCCGATGATGTTGCCTTCAGTGTTTTCTGCCTTCTGAATGCTACAGCTCTTTTCATTTCCCTTGCAGTTGTTGTTGTTCAAATCACTTTGGTGGCTTGGGATACAAGGGCTCAAAGGCAGGTTGTGTCAGTGATTAACAAGCTAATGTGGGCTGCATGTTCTTGCACTTGTGGTGCTTTTCTTGCTATATGCTTTGTGGTGGTCGGAGAGGAAACATGGCTGGCTATTGGTGTCACCCTTTTAGGAGCACCAATTCTACTTGGCACACTAGCATACTTGTGCTACTTTGTTTTTAGGCGACATTTTGGACTCCGCAGTGATTCCCAGAGACTAGTCAAGAGACCAAGTGGAAGCAAATCTTTCTCATGGTCTTACTCAATAAACATATCAGATGCGGATGCTTATGATTCTGATCATGAGAAGATGTATGCTCTGTAA 1698 0.4411 MLVTSFFFHPPLSFHSHQLFASICISFFSGAGAGEDIMDSKAMTFITHQAVFNAVRCGDLEGLKEQLKNYKGEASPEGMLSEVMSMQNDTGETLLYIAAEIGHPEVFSFLLGLCDLEVLKIRANSDMNAFHVAAKRGHLDIVKEILSIWPEVCKICDSSSTSPLYFAAVQDHLDVVNAILDVDVSSMMIVRKNGKTALHNAARYGILRIVKALIARDTGIVCIKDKKGQTALHMAVKGQSTSVVEEILQADLTIMNERDKKGNTALHMATRKARSQIVSLLLIYTAINVNAINNQKETALDLADKLPYGHPALEIKEALAECGAKHARHIGKVDEAMELKRAVSDIKHEVQSQLIQNEKTRRRVSGIAKELKKIHREAVQNTINSVTVVAVLFGSIAFMALFSLPGQYRKKQPEAGEANIADDVAFSVFCLLNATALFISLAVVVVQITLVAWDTRAQRQVVSVINKLMWAACSCTCGAFLAICFVVVGEETWLAIGVTLLGAPILLGTLAYLCYFVFRRHFGLRSDSQRLVKRPSGSKSFSWSYSINISDADAYDSDHEKMYAL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02063 565 Gene3D - 35 184 IPR036770 -
Spst2g02063 565 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 52 544 - -
Spst2g02063 565 ProSiteProfiles Ankyrin repeat profile. 261 294 IPR002110 GO:0005515
Spst2g02063 565 ProSiteProfiles Ankyrin repeat region circular profile. 193 220 - -
Spst2g02063 565 SMART ANK_2a 227 256 IPR002110 GO:0005515
Spst2g02063 565 SMART ANK_2a 193 222 IPR002110 GO:0005515
Spst2g02063 565 SMART ANK_2a 125 154 IPR002110 GO:0005515
Spst2g02063 565 SMART ANK_2a 159 189 IPR002110 GO:0005515
Spst2g02063 565 SMART ANK_2a 261 291 IPR002110 GO:0005515
Spst2g02063 565 SMART ANK_2a 90 118 IPR002110 GO:0005515
Spst2g02063 565 Pfam Ankyrin repeat 193 219 IPR002110 GO:0005515
Spst2g02063 565 Gene3D - 185 402 IPR036770 -
Spst2g02063 565 SUPERFAMILY Ankyrin repeat 51 306 IPR036770 -
Spst2g02063 565 ProSiteProfiles Ankyrin repeat region circular profile. 261 282 - -
Spst2g02063 565 Pfam Ankyrin repeats (3 copies) 225 291 IPR002110 GO:0005515
Spst2g02063 565 Pfam Ankyrin repeats (3 copies) 95 181 IPR002110 GO:0005515
Spst2g02063 565 ProSiteProfiles Ankyrin repeat profile. 193 220 IPR002110 GO:0005515
Spst2g02063 565 Pfam Domain of unknown function 377 486 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02063 Spst-Chr2 19813949 19819197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02063 38 565 Miscellaneous Gene Families AT2G01680 67.041 0.0 717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02063 2 19813949 19819197 Spst2g02063 2 19813949 19819197 ECH