Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02059 ATGCTCCGAAACTTTTGGAAACGTTGTTGTCGCCGACATTTGGGTCCCACGTTCCTCTGCTCCTCACCGACTTCGTTGTTTCACAGTGCCGTGGAGGATTCTGATTGGAAATGGAGAATCGAAGGAGAACCCTCGCTTCAGATTTCGCATCCTTGGCCCGAATGGGTCCAACTCATCAAGTGCTTGCTCCGCAAGGGACACTTTCTTCACGAAGAGGGTAACGTGTTTCACAAATCTGATTTGGGCGCCAAAGATTGCAATTTCGTTAGAACCGCTTGCCTCAATTTCGGTAGAGACCACTTTCATATTTTAAGATTCCTGTCACGAAAAGACATAGAAGTTACCGTGGCACTCGGATGTCCGAGCTTAGATAGGAAAGTGGTCAACTCTGGAAAGCGTCTGAGAGCATATGTGGGTATTGATGAGGGAAATGTATGCAGTTCCTGCAATTTGAGGGGGGACTGTGAAAGGGCATTCGTGAAGGCCCGGGAAGATGAAGGTGGAAGAACAGTAGACGTTATGCGGATTATTTTGACTTATGGGCTTGACCCAATTACTGGTTCAGTGGAAAACAAACCGTGTCTTACCAAAAAGGTAGAAGGTTCTGTGAGAAGACTGTTAAAAGAAATAGTAGAGCACAGTACCAAAGAAGAAATATCTAATTTTCCAGACAGCACAGACGTTGTCATGGGACATGTTCATTCTAATCAGCAAGGGAAGGAAAAAATAGATGTTGCAACGATGAAGCAAGGAGACTGGCTTTGCCCGAAATGCAATTTCATGAACTTTGCTAGAAACATCAGGTGCTTGCGCTGTGACAGTCTCTTCGAGGAAAGAATCAAGCAATTGAAGCAGGATAACAGTCACTTACCTTTGAAGAAGGGAGACTGGATATGCAATATATGCAATTTCCTGAATTTTGCAAAGAATACAAGATGTTTGCAATGCAAAGAGAGGCCTTCCAATCGTCACCTTAATCCCGGTGAATGGGAATGTGCCTCGTGCAATTACCTTAATTTCAGAAGAAACATGGTTTGCCTGAAATGTGACCATAGACGGCCTATAGTGTCAAGGTCCTCAAACTCTTCCCTTCAACCTCAGCAAGAAGATATAAACAACCATAAGATCGGCAAATTTGCTTTTGGGACACATCAGGGTGATAGAAGTGGTGAAACACCGATGGTGTTTGAAAGAAAGAATAAGAACAGTGATTCACACACGTGGAGATTTGTAGAGGACAGAAGTGAAAATCACAAGCGCTTAAATAAATCAAATAATCCTTCTGAATTTATAGATTTTCGTATTGTTGGTGGTAAGACTCACTTGTCTGGGGTGCAAAGGAGAGAAGCAGACAAGACTGAGTTGCCAAATCAGTGCAGAAGGCCTCCATGGGAAAGTGAAACTGATGATGAGTTTTGTTCTTCAGATAACCTGAGTACTGATGATGAGTTTTGTTCGGCGAATAATCAGAGTGCTGATGATGAAGAAATGGACGAATGGTTCGGAAAAGGCAAGATTGAAAGGTAG 1527 0.4322 MLRNFWKRCCRRHLGPTFLCSSPTSLFHSAVEDSDWKWRIEGEPSLQISHPWPEWVQLIKCLLRKGHFLHEEGNVFHKSDLGAKDCNFVRTACLNFGRDHFHILRFLSRKDIEVTVALGCPSLDRKVVNSGKRLRAYVGIDEGNVCSSCNLRGDCERAFVKAREDEGGRTVDVMRIILTYGLDPITGSVENKPCLTKKVEGSVRRLLKEIVEHSTKEEISNFPDSTDVVMGHVHSNQQGKEKIDVATMKQGDWLCPKCNFMNFARNIRCLRCDSLFEERIKQLKQDNSHLPLKKGDWICNICNFLNFAKNTRCLQCKERPSNRHLNPGEWECASCNYLNFRRNMVCLKCDHRRPIVSRSSNSSLQPQQEDINNHKIGKFAFGTHQGDRSGETPMVFERKNKNSDSHTWRFVEDRSENHKRLNKSNNPSEFIDFRIVGGKTHLSGVQRREADKTELPNQCRRPPWESETDDEFCSSDNLSTDDEFCSANNQSADDEEMDEWFGKGKIER 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02059 508 ProSiteProfiles Zinc finger RanBP2 type profile. 293 322 IPR001876 -
Spst2g02059 508 MobiDBLite consensus disorder prediction 444 468 - -
Spst2g02059 508 ProSiteProfiles Zinc finger RanBP2 type profile. 249 278 IPR001876 -
Spst2g02059 508 Gene3D - 242 275 - -
Spst2g02059 508 Gene3D - 284 320 - -
Spst2g02059 508 Gene3D - 321 355 - -
Spst2g02059 508 SUPERFAMILY Ran binding protein zinc finger-like 320 354 IPR036443 -
Spst2g02059 508 SUPERFAMILY Ran binding protein zinc finger-like 286 319 IPR036443 -
Spst2g02059 508 ProSiteProfiles Zinc finger RanBP2 type profile. 326 355 IPR001876 -
Spst2g02059 508 ProSitePatterns Zinc finger RanBP2-type signature. 297 316 IPR001876 -
Spst2g02059 508 ProSitePatterns Zinc finger RanBP2-type signature. 253 272 IPR001876 -
Spst2g02059 508 ProSitePatterns Zinc finger RanBP2-type signature. 330 349 IPR001876 -
Spst2g02059 508 SMART zf_4 295 319 IPR001876 -
Spst2g02059 508 SMART zf_4 328 352 IPR001876 -
Spst2g02059 508 SMART zf_4 251 275 IPR001876 -
Spst2g02059 508 PANTHER ZINC FINGER PROTEIN 42 279 - -
Spst2g02059 508 Pfam Zn-finger in Ran binding protein and others 328 350 IPR001876 -
Spst2g02059 508 Pfam Zn-finger in Ran binding protein and others 249 274 IPR001876 -
Spst2g02059 508 Pfam Zn-finger in Ran binding protein and others 293 317 IPR001876 -
Spst2g02059 508 MobiDBLite consensus disorder prediction 444 508 - -
Spst2g02059 508 SUPERFAMILY Ran binding protein zinc finger-like 247 274 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02059 Spst-Chr2 19775482 19779006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02059 46 354 EF-hand Containing Proteins AT1G55040 40.000 4.49e-63 218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02059 2 19775482 19779006 Spst2g02059 2 19775482 19779006 ECH