Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02057 ATGGGTTCTGAAGGATCCAGCGTTGTAGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGCGAGAAGGGAATTGGGGATGGAACTGTTAGCTATGGAATGGACGATGCTGATGACATATATATGCAGTCTTGGACTGGGACTATTATTGGTCCCCCTGGTACTGTGCACGAAGGACGTATCTACCAGTTGAAATTGTTTTGTGGCAAGGATTATCCAGACAATCCTCCATCTGTTCGATTTCAAACAAGGATTAACATGACATGTGTCAATCATGAAACTGGAGTGGTTGAGCCACAATTGTTTCCTATGCTTGCTAATTGGAAACGTGAGCGAACAATGGAAGACATTTTATTGCAATTGAAGAAAGAAATGATGTCACCACAGAATCGGAAGTTAACTCAGCCTCCTGAAGGCAATGAAGAAGCCAGGATTGATCAAAAGGTTGATGAGAAACCGATTCCACAGGATCAAAACGTTCTGCAAAAGCACGTTGGGTTCTTCGACAGGAACCAGGATGGAATCATTTATCCATGGGAGACTTTTCGAGGATTTCGAGCAATTGGTTGTGGCTATTTCTTGTCTTTTGTTGCAGCAATTTTCATCAATGGTGGTCTCAGTCACAAAACTCGCCCTGGCAAGTTTCCTTCTCTGCTGCTACCAATTGAAGTTAAAAACATTAAGAGAGCCAAACATGGAAGTGATTCTGGTGTCTATGACAGTGAAGGAAGGTTTGTTCCTTCAAAATTTGAAGAAATTTTCAGGAAGCATGCACGAACACATGCAGATGCTCTAACATCTGATGAATTGAAGGGTCTGCTTAAGGCAAACAGGGAACCTAAAGATTATGCCGGATGGCTTGCTAGCTACACAGAGTGGAAGATCCTGTATGTTCTTGGCAAAGACACTCATGGTTTACTGCACAAAGACACTATCCGAGCTGTTTACGATGGAAGCTTGTTTCAAAAAATGGAAAAGGAACATTCACGCAAGAAAATAAATAAACAGAAAGATGAGTAA 1026 0.4172 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNHETGVVEPQLFPMLANWKRERTMEDILLQLKKEMMSPQNRKLTQPPEGNEEARIDQKVDEKPIPQDQNVLQKHVGFFDRNQDGIIYPWETFRGFRAIGCGYFLSFVAAIFINGGLSHKTRPGKFPSLLLPIEVKNIKRAKHGSDSGVYDSEGRFVPSKFEEIFRKHARTHADALTSDELKGLLKANREPKDYAGWLASYTEWKILYVLGKDTHGLLHKDTIRAVYDGSLFQKMEKEHSRKKINKQKDE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02057 341 SUPERFAMILY UBC-like 9 142 IPR016135 -
Spst2g02057 341 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Spst2g02057 341 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 165 IPR000608 -
Spst2g02057 341 SMART ubc_7 14 168 - -
Spst2g02057 341 PANTHER PEROXYGENASE 3-RELATED 129 338 IPR007736 -
Spst2g02057 341 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 2 144 - -
Spst2g02057 341 Pfam Ubiquitin-conjugating enzyme 41 134 IPR000608 -
Spst2g02057 341 Pfam Caleosin related protein 159 326 IPR007736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02057 Spst-Chr2 19749179 19758249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02057 154 338 Acyl Lipid Metabolism Gene Families AT1G70670 69.730 1.04e-91 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02057 2 19749179 19758249 Spst2g02057 2 19749179 19758249 ECH